Factsheet for Bra020437.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 5
nucleus 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60000	Canola	nucleus, plastid	100.0	100.0
CDY58140	Canola	nucleus, plastid	96.67	96.67
Bra006815.1-P	Field mustard	nucleus, plastid	92.0	92.0
AT5G57520.1	Thale cress	nucleus, plastid	90.0	90.0
VIT_11s0052g01120.t01	Wine grape	nucleus	54.67	53.25
KRH02887	Soybean	nucleus	50.67	46.91
KRH19009	Soybean	nucleus	50.67	46.34
PGSC0003DMT400048247	Potato	nucleus, plastid	45.33	43.87
Solyc07g006880.1.1	Tomato	nucleus, plastid	46.0	42.33
TraesCS5B01G363600.1	Wheat	nucleus	30.67	30.87
Zm00001d031985_P001	Maize	nucleus	33.33	30.3
TraesCS7A01G276700.1	Wheat	nucleus	30.0	30.2
OQU80725	Sorghum	nucleus	33.33	30.12
TraesCS5D01G369800.1	Wheat	nucleus	31.33	29.75
TraesCS7B01G174400.1	Wheat	nucleus	30.0	29.41
TraesCS7D01G276700.1	Wheat	nucleus	30.0	29.41
HORVU5Hr1G088880.1	Barley	nucleus	28.67	29.05
EER99346	Sorghum	nucleus	32.0	28.4
TraesCS5B01G363400.1	Wheat	nucleus	28.67	28.29
Os08t0555700-00	Rice	cytosol, nucleus, plastid	29.33	27.85
HORVU0Hr1G031830.1	Barley	nucleus	27.33	27.7
TraesCS5A01G360700.1	Wheat	nucleus	29.33	27.67
HORVU5Hr1G088950.1	Barley	nucleus	30.67	26.74
TraesCS5A01G360600.1	Wheat	nucleus	30.67	26.74
TraesCS5D01G369900.1	Wheat	nucleus	30.0	26.63
TraesCS5A01G361000.1	Wheat	nucleus	28.0	26.42
TraesCS5B01G363300.1	Wheat	nucleus	30.0	26.32
Zm00001d021386_P001	Maize	nucleus	30.0	25.42
Bra008445.1-P	Field mustard	nucleus	35.33	24.42
Bra003582.1-P	Field mustard	nucleus	34.0	23.61
HORVU5Hr1G088860.1	Barley	nucleus	31.33	23.38
Bra035157.1-P	Field mustard	nucleus	33.33	23.36
HORVU7Hr1G058220.1	Barley	plastid	30.0	22.84
Bra010975.1-P	Field mustard	nucleus	32.0	22.75
Bra012496.1-P	Field mustard	nucleus	31.33	22.07
Bra009000.1-P	Field mustard	nucleus	34.67	21.49
Bra004148.1-P	Field mustard	nucleus	35.33	20.87
TraesCS5B01G363200.1	Wheat	mitochondrion	28.67	20.67
Bra039750.1-P	Field mustard	nucleus	35.33	20.23
Bra020486.1-P	Field mustard	nucleus	33.33	20.16
Bra009822.1-P	Field mustard	nucleus	33.33	19.68
Bra036535.1-P	Field mustard	nucleus	32.67	19.29

Protein Annotations

EnsemblPlants:Bra020437.1	EnsemblPlants:Bra020437.1-P	EnsemblPlantsGene:Bra020437	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF258
PFscan:PS50157	ScanProsite:PS00028	SEG:seg	SUPFAM:SSF57667	UniParc:UPI0002545EEC	UniProt:M4DV93
MapMan:15.5.15	:	:	:	:	:

Description

AT5G57520 (E=2e-065) ZFP2, ATZFP2 | ZFP2 (ZINC FINGER PROTEIN 2); nucleic acid binding / transcription factor/ zinc ion binding

Coordinates

chrA02:-:6754046..6754498

Molecular Weight (calculated)

16936.5 Da

IEP (calculated)

6.931

GRAVY (calculated)

-0.801

Length

150 amino acids

Sequence
(BLAST)

001: MDFQPNTSLR LSLPSYKNHQ LNLELVLEPS STSSSSSTNS SSCLEQPRVF SCNYCQRKFY SSQALGGHQN AHKLERTLAK KSRELFRSST TVDSDQRYPF
101: SGRFEIYGRG YEGFVESGGR MDFSGRGVSE SGLDQDQDQE MSHLDLSLRL

Best Arabidopsis Sequence Match ( AT5G57520.1 )
(BLAST)

001: MDYQPNTSLR LSLPSYKNHQ LNLELVLEPS SMSSSSSSST NSSSCLEQPR VFSCNYCQRK FYSSQALGGH QNAHKLERTL AKKSRELFRS SNTVDSDQPY
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL

Arabidopsis Description

ZFP2Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.