Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88160 | Canola | nucleus | 95.28 | 98.37 |
| Bra020486.1-P | Field mustard | nucleus | 73.62 | 75.4 |
| Bra036535.1-P | Field mustard | nucleus | 72.44 | 72.44 |
| AT5G25160.1 | Thale cress | nucleus | 66.93 | 72.34 |
| Bra009000.1-P | Field mustard | nucleus | 51.18 | 53.72 |
| VIT_09s0002g09080.t01 | Wine grape | nucleus | 41.34 | 39.33 |
| Bra008445.1-P | Field mustard | nucleus | 33.07 | 38.71 |
| Bra003582.1-P | Field mustard | nucleus | 31.5 | 37.04 |
| Bra035157.1-P | Field mustard | nucleus | 31.1 | 36.92 |
| KRH23633 | Soybean | nucleus | 33.07 | 36.84 |
| KRH44531 | Soybean | nucleus | 32.28 | 36.44 |
| Solyc06g068390.1.1 | Tomato | nucleus | 25.2 | 36.16 |
| PGSC0003DMT400073330 | Potato | nucleus | 27.95 | 35.32 |
| KRH61695 | Soybean | nucleus | 38.58 | 34.88 |
| KRH09666 | Soybean | nucleus | 35.43 | 33.83 |
| Bra006815.1-P | Field mustard | nucleus, plastid | 19.68 | 33.33 |
| Bra020437.1-P | Field mustard | nucleus, plastid | 19.68 | 33.33 |
| KRH47378 | Soybean | nucleus | 33.46 | 32.57 |
| KRH52363 | Soybean | nucleus | 36.22 | 31.4 |
| KRH15782 | Soybean | nucleus | 38.19 | 31.09 |
| GSMUA_Achr8P29430_001 | Banana | nucleus | 31.1 | 30.74 |
| GSMUA_Achr2P05140_001 | Banana | nucleus | 29.92 | 30.04 |
| KRH05270 | Soybean | nucleus | 37.8 | 29.27 |
| TraesCS6D01G135200.1 | Wheat | nucleus | 18.11 | 26.59 |
| GSMUA_Achr5P22810_001 | Banana | nucleus | 26.77 | 26.46 |
| TraesCS6A01G145900.1 | Wheat | nucleus | 18.9 | 25.95 |
| Bra012496.1-P | Field mustard | nucleus | 21.65 | 25.82 |
| GSMUA_Achr6P01990_001 | Banana | nucleus | 24.8 | 25.4 |
| HORVU0Hr1G015760.1 | Barley | nucleus | 17.32 | 25.14 |
| Bra010975.1-P | Field mustard | nucleus | 20.87 | 25.12 |
| Bra004148.1-P | Field mustard | nucleus | 24.8 | 24.8 |
| OQU84499 | Sorghum | nucleus | 18.9 | 24.62 |
| Os02t0182300-00 | Rice | cytosol, mitochondrion, peroxisome | 18.5 | 24.23 |
| Bra039750.1-P | Field mustard | nucleus | 24.41 | 23.66 |
| TraesCS5D01G354900.1 | Wheat | nucleus | 20.08 | 22.97 |
| Zm00001d015525_P001 | Maize | nucleus | 14.57 | 21.14 |
| TraesCS5D01G355400.1 | Wheat | nucleus | 18.5 | 19.42 |
| TraesCS3B01G560300.1 | Wheat | nucleus | 19.29 | 19.29 |
| EES00097 | Sorghum | nucleus | 22.05 | 18.92 |
| TraesCS3D01G505300.1 | Wheat | nucleus | 18.9 | 18.6 |
| TraesCS3A01G497500.1 | Wheat | nucleus | 18.9 | 18.46 |
| Zm00001d050143_P001 | Maize | nucleus | 19.29 | 17.31 |
Protein Annotations
| EnsemblPlants:Bra009822.1 | EnsemblPlants:Bra009822.1-P | EnsemblPlantsGene:Bra009822 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF258 |
| PFscan:PS50157 | ScanProsite:PS00028 | SUPFAM:SSF57667 | UniParc:UPI000253F2DB | UniProt:M4D024 | MapMan:15.5.15 |
Description
AT5G25160 (E=1e-086) ZFP3 | ZFP3 (ZINC FINGER PROTEIN 3); nucleic acid binding / transcription factor/ zinc ion binding
Coordinates
chrA06:+:17502037..17502801
Molecular Weight (calculated)
28318.3 Da
IEP (calculated)
7.374
GRAVY (calculated)
-0.593
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MGISMDNKLP SDTSCVALSS TAFPCKDSPN QIQEKSFKDE EADVNDSSQE LNLIDCIDTS MDVHQGYYGS TTSAEQKLFS CNYCQRTFYS SQALGGHQNA
101: HKRERTLAKR GKRMAALASS FGHPYAFSPV PFHGHYNNRS LGIQAHSMSH KLISYNGFGS PYGQINWSRL PFDQLPAIGK LSSMENFHLQ QPHQMMMDPS
201: VNVRSNYIGI PSTNIGKILV GSPITLEQWK EDGGLLSTNQ EEQHKHKLDL SLKL
101: HKRERTLAKR GKRMAALASS FGHPYAFSPV PFHGHYNNRS LGIQAHSMSH KLISYNGFGS PYGQINWSRL PFDQLPAIGK LSSMENFHLQ QPHQMMMDPS
201: VNVRSNYIGI PSTNIGKILV GSPITLEQWK EDGGLLSTNQ EEQHKHKLDL SLKL
001: MDASIVSSST AFPYQDSLNQ SIEDEERDVH NSSHELNLID CIDDTTSIVN ESTTSTEQKL FSCNYCQRTF YSSQALGGHQ NAHKRERTLA KRGQRMAASA
101: SAFGHPYGFS PLPFHGQYNN HRSLGIQAHS ISHKLSSYNG FGGHYGQINW SRLPFDQQPA IGKFPSMDNF HHHHHQMMMM APSVNSRSNN IDSPSNTGRV
201: LEGSPTLEQW HGDKGLLLST SHHEEQQKLD LSLKL
101: SAFGHPYGFS PLPFHGQYNN HRSLGIQAHS ISHKLSSYNG FGGHYGQINW SRLPFDQQPA IGKFPSMDNF HHHHHQMMMM APSVNSRSNN IDSPSNTGRV
201: LEGSPTLEQW HGDKGLLLST SHHEEQQKLD LSLKL
Arabidopsis Description
ZFP3ZFP3 zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q0WT56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.