Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09666 | Soybean | nucleus | 91.67 | 78.57 |
| KRH44531 | Soybean | nucleus | 62.72 | 63.56 |
| KRH47378 | Soybean | nucleus | 60.09 | 52.49 |
| VIT_09s0002g09080.t01 | Wine grape | nucleus | 52.63 | 44.94 |
| PGSC0003DMT400036628 | Potato | nucleus | 42.54 | 43.69 |
| Solyc03g117070.1.1 | Tomato | nucleus | 42.54 | 42.36 |
| Bra035157.1-P | Field mustard | nucleus | 36.84 | 39.25 |
| CDY39947 | Canola | nucleus | 37.72 | 39.09 |
| AT1G80730.1 | Thale cress | nucleus | 38.6 | 38.6 |
| Bra008445.1-P | Field mustard | nucleus | 36.4 | 38.25 |
| CDX87338 | Canola | nucleus | 36.84 | 37.5 |
| Bra003582.1-P | Field mustard | nucleus | 35.09 | 37.04 |
| AT5G25160.1 | Thale cress | nucleus | 37.72 | 36.6 |
| KRH02887 | Soybean | nucleus | 25.88 | 36.42 |
| CDY66132 | Canola | nucleus | 36.4 | 36.4 |
| KRH19009 | Soybean | nucleus | 25.88 | 35.98 |
| CDY71759 | Canola | nucleus | 35.53 | 35.68 |
| CDX79357 | Canola | nucleus | 35.09 | 35.4 |
| KRH61695 | Soybean | nucleus | 43.42 | 35.23 |
| CDX67963 | Canola | nucleus | 34.65 | 34.96 |
| CDY05474 | Canola | nucleus | 37.72 | 34.68 |
| Bra020486.1-P | Field mustard | nucleus | 37.72 | 34.68 |
| GSMUA_Achr2P05140_001 | Banana | nucleus | 38.16 | 34.39 |
| CDX88160 | Canola | nucleus | 36.84 | 34.15 |
| CDY05377 | Canola | nucleus | 36.84 | 33.87 |
| KRH15782 | Soybean | nucleus | 46.05 | 33.65 |
| Bra009000.1-P | Field mustard | nucleus | 35.53 | 33.47 |
| CDX97070 | Canola | nucleus | 35.53 | 33.47 |
| CDX69795 | Canola | nucleus | 35.53 | 33.47 |
| KRH52363 | Soybean | nucleus | 42.54 | 33.11 |
| GSMUA_Achr5P22810_001 | Banana | nucleus | 37.28 | 33.07 |
| Bra009822.1-P | Field mustard | nucleus | 36.84 | 33.07 |
| KRH05270 | Soybean | nucleus | 46.05 | 32.01 |
| AT5G10970.1 | Thale cress | nucleus | 38.16 | 31.99 |
| Bra036535.1-P | Field mustard | nucleus | 34.65 | 31.1 |
| CDY19813 | Canola | nucleus | 34.65 | 31.1 |
| GSMUA_Achr6P01990_001 | Banana | nucleus | 33.77 | 31.05 |
| GSMUA_Achr8P29430_001 | Banana | nucleus | 34.65 | 30.74 |
| CDX87097 | Canola | plastid | 17.54 | 28.78 |
| TraesCS6A01G145900.1 | Wheat | nucleus | 22.81 | 28.11 |
| TraesCS6D01G135200.1 | Wheat | nucleus | 21.05 | 27.75 |
| HORVU0Hr1G015760.1 | Barley | nucleus | 20.61 | 26.86 |
| KRH17304 | Soybean | nucleus | 30.26 | 26.85 |
| KRG91058 | Soybean | nucleus | 22.37 | 26.7 |
| KRH57480 | Soybean | nucleus | 23.25 | 26.63 |
| KRH58019 | Soybean | nucleus | 23.25 | 26.63 |
| KRH35714 | Soybean | nucleus | 21.93 | 26.6 |
| KRH72952 | Soybean | nucleus | 29.82 | 26.46 |
| KRG97966 | Soybean | nucleus | 28.95 | 26.29 |
| KRH58613 | Soybean | nucleus | 28.51 | 26.1 |
| KRH42519 | Soybean | nucleus | 28.51 | 25.9 |
| KRH30916 | Soybean | nucleus | 27.19 | 24.9 |
| KRG89273 | Soybean | nucleus | 25.88 | 24.79 |
| KRH04587 | Soybean | cytosol | 21.49 | 24.75 |
| TraesCS5D01G354900.1 | Wheat | nucleus | 23.68 | 24.32 |
| KRH04497 | Soybean | nucleus | 21.93 | 23.81 |
| KRH49708 | Soybean | nucleus | 26.32 | 23.62 |
| OQU84499 | Sorghum | nucleus | 19.74 | 23.08 |
| TraesCS5D01G355400.1 | Wheat | nucleus | 24.12 | 22.73 |
| TraesCS3D01G505300.1 | Wheat | nucleus | 25.44 | 22.48 |
| TraesCS3B01G560300.1 | Wheat | nucleus | 25.0 | 22.44 |
| Os02t0182300-00 | Rice | cytosol, mitochondrion, peroxisome | 18.86 | 22.16 |
| TraesCS3A01G497500.1 | Wheat | nucleus | 24.56 | 21.54 |
| EES00097 | Sorghum | nucleus | 27.19 | 20.95 |
| Zm00001d050143_P001 | Maize | nucleus | 24.56 | 19.79 |
| Zm00001d015525_P001 | Maize | nucleus | 14.04 | 18.29 |
Protein Annotations
| EMBL:ACUP02008482 | EnsemblPlants:KRH23633 | EnsemblPlantsGene:GLYMA_13G369500 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR013087 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PFscan:PS50157 | ProteinID:KRH23633 | ProteinID:KRH23633.1 | ScanProsite:PS00028 |
| SUPFAM:SSF57667 | UniParc:UPI0006ED5D95 | UniProt:A0A0R0GZ28 | MapMan:15.5.15 | : | : |
Description
hypothetical protein
Coordinates
chr13:-:45498392..45499078
Molecular Weight (calculated)
25192.6 Da
IEP (calculated)
8.488
GRAVY (calculated)
-0.734
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTQKEKKED NEHPHESASD LVLDLSLPSK HSGGDGESKP ELNLINCIDT NLSMNSSESS HGHGDELEPR IFSCNYCQRK FYSSQALGGH QNAHKRERTL
101: VKRGHKAGAA VSIDFARRYS SMASLPLHGS YNRSSLGIQA HSMISKPSYQ SPFFGLSRSH AQKRPMFSQP PIGTESESSL TGGIPVPRLG NFSPRLVPEG
201: LGGYWLDSVN HLKTKQEELH KLDLSLKL
101: VKRGHKAGAA VSIDFARRYS SMASLPLHGS YNRSSLGIQA HSMISKPSYQ SPFFGLSRSH AQKRPMFSQP PIGTESESSL TGGIPVPRLG NFSPRLVPEG
201: LGGYWLDSVN HLKTKQEELH KLDLSLKL
001: MEPSIKGDQE MLKIKKQGHQ DLELGLTLLS RGTATSSELN LIDSFKTSSS STSHHQHQQE QLADPRVFSC NYCQRKFYSS QALGGHQNAH KRERTLAKRG
101: QYYKMTLSSL PSSAFAFGHG SVSRFASMAS LPLHGSVNNR STLGIQAHST IHKPSFLGRQ TTSLSHVFKQ SIHQKPTIGK MLPEKFHLEV AGNNNSNMVA
201: AKLERIGHFK SNQEDHNQFK KIDLTLKL
101: QYYKMTLSSL PSSAFAFGHG SVSRFASMAS LPLHGSVNNR STLGIQAHST IHKPSFLGRQ TTSLSHVFKQ SIHQKPTIGK MLPEKFHLEV AGNNNSNMVA
201: AKLERIGHFK SNQEDHNQFK KIDLTLKL
Arabidopsis Description
ZFP1At1g80730 [Source:UniProtKB/TrEMBL;Acc:Q0V814]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.