Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d050143_P001 | Maize | nucleus | 69.93 | 73.14 |
| TraesCS5D01G354900.1 | Wheat | nucleus | 40.88 | 54.5 |
| TraesCS3B01G560300.1 | Wheat | nucleus | 46.28 | 53.94 |
| TraesCS5D01G355400.1 | Wheat | nucleus | 43.58 | 53.31 |
| TraesCS3D01G505300.1 | Wheat | nucleus | 45.95 | 52.71 |
| TraesCS3A01G497500.1 | Wheat | nucleus | 44.26 | 50.38 |
| OQU80725 | Sorghum | nucleus | 18.58 | 33.13 |
| EER99346 | Sorghum | nucleus | 17.23 | 30.18 |
| KRH44531 | Soybean | nucleus | 21.62 | 28.44 |
| GSMUA_Achr2P05140_001 | Banana | nucleus | 23.65 | 27.67 |
| KRH23633 | Soybean | nucleus | 20.95 | 27.19 |
| VIT_09s0002g09080.t01 | Wine grape | nucleus | 24.32 | 26.97 |
| EER97478 | Sorghum | nucleus | 15.88 | 26.4 |
| Bra008445.1-P | Field mustard | nucleus | 18.92 | 25.81 |
| Bra035157.1-P | Field mustard | nucleus | 18.58 | 25.7 |
| Bra003582.1-P | Field mustard | nucleus | 18.58 | 25.46 |
| Solyc06g068390.1.1 | Tomato | nucleus | 15.2 | 25.42 |
| CDX79357 | Canola | nucleus | 19.26 | 25.22 |
| AT1G80730.1 | Thale cress | nucleus | 19.26 | 25.0 |
| CDY39947 | Canola | nucleus | 18.58 | 25.0 |
| CDY66132 | Canola | nucleus | 18.92 | 24.56 |
| CDX87338 | Canola | nucleus | 18.58 | 24.55 |
| EER92577 | Sorghum | cytosol, mitochondrion, nucleus | 18.92 | 24.45 |
| CDX97070 | Canola | nucleus | 19.93 | 24.38 |
| CDX67963 | Canola | nucleus | 18.58 | 24.34 |
| AT5G25160.1 | Thale cress | nucleus | 19.26 | 24.26 |
| GSMUA_Achr5P22810_001 | Banana | nucleus | 20.95 | 24.12 |
| OQU84499 | Sorghum | nucleus | 15.88 | 24.1 |
| CDX69795 | Canola | nucleus | 19.59 | 23.97 |
| Bra009000.1-P | Field mustard | nucleus | 19.59 | 23.97 |
| GSMUA_Achr6P01990_001 | Banana | nucleus | 19.93 | 23.79 |
| KRH61695 | Soybean | nucleus | 22.3 | 23.49 |
| CDY71759 | Canola | nucleus | 17.91 | 23.35 |
| GSMUA_Achr8P29430_001 | Banana | nucleus | 20.27 | 23.35 |
| KRH09666 | Soybean | nucleus | 20.95 | 23.31 |
| Bra020486.1-P | Field mustard | nucleus | 19.26 | 22.98 |
| CDY05474 | Canola | nucleus | 19.26 | 22.98 |
| CDY05377 | Canola | nucleus | 19.26 | 22.98 |
| PGSC0003DMT400073330 | Potato | nucleus | 15.54 | 22.89 |
| CDX88160 | Canola | nucleus | 18.92 | 22.76 |
| KRH47378 | Soybean | nucleus | 19.93 | 22.61 |
| AT5G10970.1 | Thale cress | nucleus | 20.61 | 22.43 |
| Bra036535.1-P | Field mustard | nucleus | 18.92 | 22.05 |
| Bra009822.1-P | Field mustard | nucleus | 18.92 | 22.05 |
| CDY19813 | Canola | nucleus | 18.92 | 22.05 |
| KRH52363 | Soybean | nucleus | 21.62 | 21.84 |
| KRH15782 | Soybean | nucleus | 22.97 | 21.79 |
| KRH05270 | Soybean | nucleus | 22.64 | 20.43 |
| EER91243 | Sorghum | nucleus | 17.91 | 20.08 |
| CDX87097 | Canola | plastid | 8.78 | 18.7 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | UniProt:C5XL74 | EnsemblPlants:EES00097 | ProteinID:EES00097 | ProteinID:EES00097.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | InterPro:IPR013087 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF311 |
| EnsemblPlantsGene:SORBI_3003G025500 | SUPFAM:SSF57667 | UniParc:UPI0001A843B5 | RefSeq:XP_002454977.1 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:2151195..2152085
Molecular Weight (calculated)
30764.6 Da
IEP (calculated)
7.006
GRAVY (calculated)
-0.613
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKGSSSRTA SKEVEGMGVQ QPEDGEENVQ APGKEEEVSS AKELDLLGVL GSEPPEVKAV EAVAPGKGKE KAMVAEEEKS PATGTGTGTG TATASGGVEK
101: KRSFKCNYCQ RKFYTSQALG GHQNAHKRER SLAKRGAAAV AAAAAAGGRG LYGGADPFLS PHHLRFHHAW PYSAGGSRPS PFLGFGRGSA AAPFYGVHHG
201: WSAHAQTQPS MAGLTRHTGA DLPVYTPHGY GYGSSSRAPA PAVLDSTMAG LRWSGTVVDS GAGASSDHGV VEHEGPTQQE EEKEEQSCKI DLNLKL
101: KRSFKCNYCQ RKFYTSQALG GHQNAHKRER SLAKRGAAAV AAAAAAGGRG LYGGADPFLS PHHLRFHHAW PYSAGGSRPS PFLGFGRGSA AAPFYGVHHG
201: WSAHAQTQPS MAGLTRHTGA DLPVYTPHGY GYGSSSRAPA PAVLDSTMAG LRWSGTVVDS GAGASSDHGV VEHEGPTQQE EEKEEQSCKI DLNLKL
001: MDASIVSSST AFPYQDSLNQ SIEDEERDVH NSSHELNLID CIDDTTSIVN ESTTSTEQKL FSCNYCQRTF YSSQALGGHQ NAHKRERTLA KRGQRMAASA
101: SAFGHPYGFS PLPFHGQYNN HRSLGIQAHS ISHKLSSYNG FGGHYGQINW SRLPFDQQPA IGKFPSMDNF HHHHHQMMMM APSVNSRSNN IDSPSNTGRV
201: LEGSPTLEQW HGDKGLLLST SHHEEQQKLD LSLKL
101: SAFGHPYGFS PLPFHGQYNN HRSLGIQAHS ISHKLSSYNG FGGHYGQINW SRLPFDQQPA IGKFPSMDNF HHHHHQMMMM APSVNSRSNN IDSPSNTGRV
201: LEGSPTLEQW HGDKGLLLST SHHEEQQKLD LSLKL
Arabidopsis Description
ZFP3ZFP3 zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q0WT56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.