CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025350_P001	Maize	nucleus	60.11	91.45
Zm00001d052006_P001	Maize	nucleus	59.55	90.6
Zm00001d039773_P001	Maize	nucleus	59.55	90.6
Zm00001d002745_P001	Maize	nucleus	59.55	90.6
Zm00001d035262_P001	Maize	nucleus	58.99	89.74
Zm00001d006367_P001	Maize	nucleus	58.99	89.74
Zm00001d016069_P001	Maize	nucleus	58.99	89.74
Zm00001d022022_P001	Maize	nucleus	89.33	89.33
Zm00001d035257_P001	Maize	nucleus	58.43	88.89
Zm00001d006754_P001	Maize	nucleus	88.76	85.87
TraesCS2B01G210500.1	Wheat	nucleus	66.85	66.48
TraesCS2A01G183800.1	Wheat	nucleus	65.17	66.29
TraesCS2D01G191700.1	Wheat	nucleus	66.29	65.92
HORVU2Hr1G034650.1	Barley	nucleus	64.04	63.69
Os07t0593000-01	Rice	nucleus	63.48	60.11
GSMUA_Achr4P10880_001	Banana	nucleus	42.13	40.11
GSMUA_Achr4P03360_001	Banana	nucleus	39.89	39.44
VIT_18s0001g09590.t01	Wine grape	nucleus	39.89	36.79
Solyc01g107430.2.1	Tomato	nucleus	34.83	35.84
KRH58019	Soybean	nucleus	39.89	35.68
VIT_03s0091g00260.t01	Wine grape	nucleus	37.64	35.45
KRH35714	Soybean	nucleus	37.08	35.11
KRG91058	Soybean	nucleus	37.64	35.08
PGSC0003DMT400066536	Potato	nucleus	33.71	34.68
PGSC0003DMT400059824	Potato	nucleus	32.02	33.14
VIT_07s0129g00670.t01	Wine grape	nucleus	35.39	32.64
Solyc10g049870.1.1	Tomato	nucleus	31.46	32.56
KRH57480	Soybean	nucleus	34.83	31.16
KRH04497	Soybean	nucleus	36.52	30.95
OQU80725	Sorghum	nucleus	24.16	25.9
EER91243	Sorghum	nucleus	37.64	25.38
EER92577	Sorghum	cytosol, mitochondrion, nucleus	32.02	24.89
EER99346	Sorghum	nucleus	23.6	24.85
OQU84499	Sorghum	nucleus	26.4	24.1
EES00097	Sorghum	nucleus	26.4	15.88

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EntrezGene:8060620	UniProt:C5XD61	EnsemblPlants:EER97478	ProteinID:EER97478
ProteinID:EER97478.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	InterPro:IPR013087	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR26374
PANTHER:PTHR26374:SF250	EnsemblPlantsGene:SORBI_3002G361600	SUPFAM:SSF57667	UniParc:UPI0001A83838	RefSeq:XP_002460957.1	InterPro:Znf_C2H2_sf
InterPro:Znf_C2H2_type	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:72324525..72325061

Molecular Weight (calculated)

19815.7 Da

IEP (calculated)

9.698

GRAVY (calculated)

-0.569

Length

178 amino acids

Sequence
(BLAST)

001: MERVPGVEEQ KSADQVNKAG LTDDNTIVPW LKLGLDAPKS EEAKPQEVKP VATPHRTFSC NYCMRKFFSS QALGGHQNAH KRERCAARKS HRFQLMMGLP
101: PSASFLQPLR VNSHSTILKD HGERASVVVA RFDGGRMSGW MPFAIEEPGG LVWPGSFTAS SEESKKQIEK NLDLTLRL

Best Arabidopsis Sequence Match ( AT1G24625.1 )
(BLAST)

001: MTESDDASRE TPASRGGEAS SNQDLSKPES NHVSLDLKLN DTFNDDTKST KCEANPRVFS CNYCRRKFYS SQALGGHQNA HKRERTMAKR AMHMGRMFGH
101: HHRPYTYTSS SLGMQAHSGL LHHTLSQPQP LVSRFHHQGY FGNTVPLFFD YDDGGSDFFW PGSFRQVVEE AEAPVVVVAS TESGLDLNSV AANGGVDNNS
201: SKPDLTLRL

Arabidopsis Description

ZFP7Zinc finger protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q39266]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.