Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P10880_001 | Banana | nucleus | 65.56 | 63.1 |
| GSMUA_Achr10P... | Banana | nucleus | 51.11 | 50.55 |
| GSMUA_Achr6P24010_001 | Banana | nucleus | 44.44 | 45.98 |
| VIT_03s0091g00260.t01 | Wine grape | nucleus | 44.44 | 42.33 |
| Solyc01g107430.2.1 | Tomato | nucleus | 40.0 | 41.62 |
| PGSC0003DMT400066536 | Potato | nucleus | 39.44 | 41.04 |
| Zm00001d052006_P001 | Maize | nucleus | 26.67 | 41.03 |
| Zm00001d039773_P001 | Maize | nucleus | 26.67 | 41.03 |
| Zm00001d035262_P001 | Maize | nucleus | 26.67 | 41.03 |
| Zm00001d035257_P001 | Maize | nucleus | 26.67 | 41.03 |
| Zm00001d002745_P001 | Maize | nucleus | 26.67 | 41.03 |
| Zm00001d025350_P001 | Maize | nucleus | 26.67 | 41.03 |
| Zm00001d016069_P001 | Maize | nucleus | 26.67 | 41.03 |
| Zm00001d006754_P001 | Maize | nucleus | 41.67 | 40.76 |
| Zm00001d022022_P001 | Maize | nucleus | 40.0 | 40.45 |
| Zm00001d006367_P001 | Maize | nucleus | 26.11 | 40.17 |
| EER97478 | Sorghum | nucleus | 39.44 | 39.89 |
| PGSC0003DMT400059824 | Potato | nucleus | 37.78 | 39.53 |
| Solyc10g049870.1.1 | Tomato | nucleus | 37.22 | 38.95 |
| VIT_07s0129g00670.t01 | Wine grape | nucleus | 41.11 | 38.34 |
| KRG91058 | Soybean | nucleus | 40.56 | 38.22 |
| VIT_18s0001g09590.t01 | Wine grape | nucleus | 40.56 | 37.82 |
| KRH35714 | Soybean | nucleus | 39.44 | 37.77 |
| TraesCS2B01G210500.1 | Wheat | nucleus | 36.67 | 36.87 |
| TraesCS2D01G191700.1 | Wheat | nucleus | 36.67 | 36.87 |
| TraesCS2A01G183800.1 | Wheat | nucleus | 35.56 | 36.57 |
| HORVU2Hr1G034650.1 | Barley | nucleus | 35.56 | 35.75 |
| Os07t0593000-01 | Rice | nucleus | 37.22 | 35.64 |
| KRH57480 | Soybean | nucleus | 37.78 | 34.17 |
| KRH58019 | Soybean | nucleus | 36.67 | 33.17 |
| KRH04497 | Soybean | nucleus | 36.11 | 30.95 |
| GSMUA_Achr6P11350_001 | Banana | nucleus | 35.56 | 28.83 |
| GSMUA_Achr2P05140_001 | Banana | nucleus | 32.22 | 22.92 |
| GSMUA_Achr10P... | Banana | nucleus | 25.56 | 22.22 |
| GSMUA_Achr6P01990_001 | Banana | nucleus | 30.56 | 22.18 |
| GSMUA_Achr8P29430_001 | Banana | nucleus | 29.44 | 20.62 |
| GSMUA_Achr5P22810_001 | Banana | nucleus | 28.89 | 20.23 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P03360_001 | EnsemblPlants:GSMUA_Achr4T03360_001 | EnsemblPlantsGene:GSMUA_Achr4G03360_001 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF228 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI0002958B13 | UniProt:M0SKQ3 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
Putative ZOS12-08 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G03360_001]
Coordinates
chr4:+:2677841..2678383
Molecular Weight (calculated)
20241.8 Da
IEP (calculated)
7.256
GRAVY (calculated)
-0.804
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPGELGEEP AASSQNPPRD PAASDGSAMA GDEREEWLNL TLGGRSSSSS QPRPPPSHRM FSCNYCMRKF FSSQALGGHQ NAHKRERCAA RRSNTPQRMM
101: MMMMAASPLH VPFLHSLNVV RPHSMVHERF REPEAASFDH TKATWSPFVV DEASRSSWTE SFQMESEPPQ QQKLDLSLRL
101: MMMMAASPLH VPFLHSLNVV RPHSMVHERF REPEAASFDH TKATWSPFVV DEASRSSWTE SFQMESEPPQ QQKLDLSLRL
001: MAEPPPSYLH FVGPAKTRSS SKRHSFSSSA HPASHRLFPC QYCPRKFYTS QALGGHQNAH KRERAAARRN LGVLANSPPI LDDNNTFLRP YPCFYQNPFQ
101: GSTSGNEPLQ EQPTMMTMDG YDPFHPYPYV YPFALSGNNN DGGNGVMEED EPLDLDLSLR L
101: GSTSGNEPLQ EQPTMMTMDG YDPFHPYPYV YPFALSGNNN DGGNGVMEED EPLDLDLSLR L
Arabidopsis Description
KNUZinc finger protein KNUCKLES [Source:UniProtKB/Swiss-Prot;Acc:Q9FFX4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.