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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P22810_001 Banana nucleus 66.13 63.81
GSMUA_Achr2P05140_001 Banana nucleus 43.55 42.69
GSMUA_Achr8P29430_001 Banana nucleus 39.92 38.52
PGSC0003DMT400036628 Potato nucleus 31.05 34.68
VIT_09s0002g09080.t01 Wine grape nucleus 37.1 34.46
Solyc03g117070.1.1 Tomato nucleus 31.45 34.06
KRH23633 Soybean nucleus 31.05 33.77
KRH44531 Soybean nucleus 29.84 32.89
Bra003582.1-P Field mustard nucleus 28.23 32.41
CDX79357 Canola nucleus 29.44 32.3
CDX67963 Canola nucleus 29.03 31.86
AT1G80730.1 Thale cress nucleus 29.03 31.58
CDY66132 Canola nucleus 29.03 31.58
Bra008445.1-P Field mustard nucleus 27.42 31.34
CDY39947 Canola nucleus 27.42 30.91
CDY71759 Canola nucleus 28.23 30.84
KRH09666 Soybean nucleus 33.06 30.83
GSMUA_Achr4P03360_001 Banana nucleus 22.18 30.56
GSMUA_Achr4P10880_001 Banana nucleus 22.98 30.48
Bra035157.1-P Field mustard nucleus 26.21 30.37
CDX97070 Canola nucleus 29.44 30.17
CDX69795 Canola nucleus 29.44 30.17
Bra009000.1-P Field mustard nucleus 29.44 30.17
CDX87338 Canola nucleus 27.02 29.91
KRH47378 Soybean nucleus 31.05 29.5
AT5G25160.1 Thale cress nucleus 27.42 28.94
GSMUA_Achr6P11350_001 Banana nucleus 25.4 28.38
GSMUA_Achr6P24010_001 Banana nucleus 19.76 28.16
TraesCS6D01G135200.1 Wheat nucleus 19.35 27.75
CDY05474 Canola nucleus 27.02 27.02
Bra020486.1-P Field mustard nucleus 27.02 27.02
AT5G10970.1 Thale cress nucleus 29.44 26.84
CDY05377 Canola nucleus 26.61 26.61
GSMUA_Achr10P... Banana nucleus 19.35 26.37
HORVU0Hr1G015760.1 Barley nucleus 18.55 26.29
CDX88160 Canola nucleus 25.4 25.61
TraesCS6A01G145900.1 Wheat nucleus 18.95 25.41
OQU84499 Sorghum nucleus 19.76 25.13
Bra009822.1-P Field mustard nucleus 25.4 24.8
TraesCS5D01G354900.1 Wheat nucleus 22.18 24.77
CDY19813 Canola nucleus 24.6 24.02
Bra036535.1-P Field mustard nucleus 24.6 24.02
TraesCS5D01G355400.1 Wheat nucleus 22.98 23.55
TraesCS3D01G505300.1 Wheat nucleus 23.79 22.87
TraesCS3B01G560300.1 Wheat nucleus 23.39 22.83
TraesCS3A01G497500.1 Wheat nucleus 23.79 22.69
GSMUA_Achr10P... Banana nucleus 18.55 22.22
Os02t0182300-00 Rice cytosol, mitochondrion, peroxisome 17.34 22.16
Zm00001d015525_P001 Maize nucleus 15.32 21.71
EES00097 Sorghum nucleus 23.79 19.93
Zm00001d050143_P001 Maize nucleus 22.58 19.79
CDX87097 Canola plastid 10.89 19.42
Protein Annotations
EnsemblPlants:GSMUA_Achr6P01990_001EnsemblPlants:GSMUA_Achr6T01990_001EnsemblPlantsGene:GSMUA_Achr6G01990_001Gene3D:3.30.160.60GO:GO:0003674GO:GO:0003676
GO:GO:0005488InterPro:IPR013087InterPro:Znf_C2H2_sfInterPro:Znf_C2H2_typePANTHER:PTHR26374PANTHER:PTHR26374:SF258
PFscan:PS50157ScanProsite:PS00028SEG:segSUPFAM:SSF57667UniParc:UPI000295F539UniProt:M0T3E7
MapMan:15.5.15:::::
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G01990_001]
Coordinates
chr6:+:1288887..1289633
Molecular Weight (calculated)
27113.0 Da
IEP (calculated)
6.587
GRAVY (calculated)
-0.502
Length
248 amino acids
Sequence
(BLAST)
001: MAALGFAVDA TLSRTSSAHS DTRVAKDEPV MALEEEEQRQ EGIGEQPEFN GKLLDLSLSN SDTEKTTSPG TPVLVLNLIE SLGSVEPPNP ESSESEPRVF
101: SCNYCRRKFY SSQALGGHQN AHKRERSLAK NGGRGGARLG DQFSHRLPPS MAALPLHALY GGRHLGVQVH SMIHKPYYGT SSGIVLHEQH RPTMIFDQQH
201: GVGTRTSVLV ERFDEPGVMT GDIRWVDAGD GGVVSRKEVQ MLDLTLRL
Best Arabidopsis Sequence Match ( AT5G10970.1 )
(BLAST)
001: MDSSSGKPRS SDSSCIISAS TSLQFSDSPK LSLENYNIDT VAAQEEDDHD QKEGVEGIKL DLMLAGYDSS QPQLNQELNL LDCLETGVVT PSFNGSTSTE
101: QKLFSCNYCQ RTFYSSQALG GHQNAHKRER TLAKRGQRMA SAAAFGHPYG FAPVPFHGQY SNRTLGIQAH SMSHKPSSYN VYGGEYGQIN WSRIPLVQQP
201: AIAKLTSTEN HYNHHQMMIA PPLTSTCENI GRFDVGRIPV EFPTSELWQR GEELLKPAEE EKQKNLDLSL KL
Arabidopsis Description
C2H2 and C2HC zinc fingers superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LEU3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.