Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87338 | Canola | nucleus | 99.53 | 95.09 |
| Bra008445.1-P | Field mustard | nucleus | 83.18 | 82.03 |
| Bra003582.1-P | Field mustard | nucleus | 79.91 | 79.17 |
| AT1G80730.1 | Thale cress | nucleus | 80.37 | 75.44 |
| VIT_09s0002g09080.t01 | Wine grape | nucleus | 46.73 | 37.45 |
| KRH23633 | Soybean | nucleus | 39.25 | 36.84 |
| KRH44531 | Soybean | nucleus | 37.38 | 35.56 |
| Bra020486.1-P | Field mustard | nucleus | 38.78 | 33.47 |
| Bra006815.1-P | Field mustard | nucleus, plastid | 23.36 | 33.33 |
| Solyc06g068390.1.1 | Tomato | nucleus | 27.57 | 33.33 |
| PGSC0003DMT400073330 | Potato | nucleus | 31.31 | 33.33 |
| Bra020437.1-P | Field mustard | nucleus, plastid | 23.36 | 33.33 |
| KRH61695 | Soybean | nucleus | 42.99 | 32.74 |
| KRH09666 | Soybean | nucleus | 40.65 | 32.71 |
| Bra009000.1-P | Field mustard | nucleus | 35.98 | 31.82 |
| Bra009822.1-P | Field mustard | nucleus | 36.92 | 31.1 |
| Bra036535.1-P | Field mustard | nucleus | 36.92 | 31.1 |
| KRH47378 | Soybean | nucleus | 37.85 | 31.03 |
| GSMUA_Achr2P05140_001 | Banana | nucleus | 35.51 | 30.04 |
| KRH52363 | Soybean | nucleus | 40.65 | 29.69 |
| TraesCS6D01G135200.1 | Wheat | nucleus | 23.36 | 28.9 |
| TraesCS6A01G145900.1 | Wheat | nucleus | 24.3 | 28.11 |
| GSMUA_Achr5P22810_001 | Banana | nucleus | 33.64 | 28.02 |
| HORVU0Hr1G015760.1 | Barley | nucleus | 22.9 | 28.0 |
| GSMUA_Achr8P29430_001 | Banana | nucleus | 33.18 | 27.63 |
| KRH15782 | Soybean | nucleus | 39.72 | 27.24 |
| Bra012496.1-P | Field mustard | nucleus | 26.64 | 26.76 |
| Bra004148.1-P | Field mustard | nucleus | 31.31 | 26.38 |
| Bra039750.1-P | Field mustard | nucleus | 32.24 | 26.34 |
| GSMUA_Achr6P01990_001 | Banana | nucleus | 30.37 | 26.21 |
| OQU84499 | Sorghum | nucleus | 23.83 | 26.15 |
| Bra010975.1-P | Field mustard | nucleus | 25.7 | 26.07 |
| KRH05270 | Soybean | nucleus | 39.72 | 25.91 |
| Os02t0182300-00 | Rice | cytosol, mitochondrion, peroxisome | 23.36 | 25.77 |
| TraesCS5D01G354900.1 | Wheat | nucleus | 22.9 | 22.07 |
| Zm00001d015525_P001 | Maize | nucleus | 17.76 | 21.71 |
| TraesCS3B01G560300.1 | Wheat | nucleus | 23.83 | 20.08 |
| TraesCS3D01G505300.1 | Wheat | nucleus | 23.83 | 19.77 |
| TraesCS3A01G497500.1 | Wheat | nucleus | 23.83 | 19.62 |
| TraesCS5D01G355400.1 | Wheat | nucleus | 21.96 | 19.42 |
| EES00097 | Sorghum | nucleus | 25.7 | 18.58 |
| Zm00001d050143_P001 | Maize | nucleus | 22.9 | 17.31 |
Protein Annotations
| EnsemblPlants:Bra035157.1 | EnsemblPlants:Bra035157.1-P | EnsemblPlantsGene:Bra035157 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF258 |
| PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | UniParc:UPI0002541E25 | UniProt:M4F260 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
AT1G80730 (E=2e-077) ZFP1, ATZFP1 | ZFP1 (ZINC-FINGER PROTEIN 1); nucleic acid binding / transcription factor/ zinc ion binding
Coordinates
chrA07:+:22401804..22402448
Molecular Weight (calculated)
24081.3 Da
IEP (calculated)
10.268
GRAVY (calculated)
-0.715
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKIKKRCYQ DLELGLTLFP RGTTSSELNL IDSFKTSSSS TSHHHPNRQE HVEDPRTFSC NYCQRKFYSS QALGGHQNAH KRERTLAKRG HYYKMSLSSS
101: YSSSSSSSPS SAFAFGHGSV SRFASMASLP LHGSPSNRST LEIHAHSTIH NPCLGRQTAS LSHVFKQSVH QKPAIGKVMP EKFHIEVANS NIEYFKSKQE
201: DHNQFKKIDL TLKL
101: YSSSSSSSPS SAFAFGHGSV SRFASMASLP LHGSPSNRST LEIHAHSTIH NPCLGRQTAS LSHVFKQSVH QKPAIGKVMP EKFHIEVANS NIEYFKSKQE
201: DHNQFKKIDL TLKL
001: MEPSIKGDQE MLKIKKQGHQ DLELGLTLLS RGTATSSELN LIDSFKTSSS STSHHQHQQE QLADPRVFSC NYCQRKFYSS QALGGHQNAH KRERTLAKRG
101: QYYKMTLSSL PSSAFAFGHG SVSRFASMAS LPLHGSVNNR STLGIQAHST IHKPSFLGRQ TTSLSHVFKQ SIHQKPTIGK MLPEKFHLEV AGNNNSNMVA
201: AKLERIGHFK SNQEDHNQFK KIDLTLKL
101: QYYKMTLSSL PSSAFAFGHG SVSRFASMAS LPLHGSVNNR STLGIQAHST IHKPSFLGRQ TTSLSHVFKQ SIHQKPTIGK MLPEKFHLEV AGNNNSNMVA
201: AKLERIGHFK SNQEDHNQFK KIDLTLKL
Arabidopsis Description
ZFP1At1g80730 [Source:UniProtKB/TrEMBL;Acc:Q0V814]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.