Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61695 | Soybean | nucleus | 81.57 | 85.05 |
| KRH15782 | Soybean | nucleus | 56.31 | 52.88 |
| KRH05270 | Soybean | nucleus | 57.0 | 50.91 |
| KRH23633 | Soybean | nucleus | 33.11 | 42.54 |
| AT1G80730.1 | Thale cress | nucleus | 32.08 | 41.23 |
| Bra035157.1-P | Field mustard | nucleus | 29.69 | 40.65 |
| CDY39947 | Canola | nucleus | 30.38 | 40.45 |
| AT5G25160.1 | Thale cress | nucleus | 32.08 | 40.0 |
| CDX87338 | Canola | nucleus | 30.38 | 39.73 |
| KRH44531 | Soybean | nucleus | 30.38 | 39.56 |
| Bra008445.1-P | Field mustard | nucleus | 29.01 | 39.17 |
| Bra003582.1-P | Field mustard | nucleus | 28.67 | 38.89 |
| CDX69795 | Canola | nucleus | 31.74 | 38.43 |
| Bra009000.1-P | Field mustard | nucleus | 31.74 | 38.43 |
| Bra020486.1-P | Field mustard | nucleus | 32.42 | 38.31 |
| CDY05474 | Canola | nucleus | 32.42 | 38.31 |
| CDY05377 | Canola | nucleus | 32.42 | 38.31 |
| CDY66132 | Canola | nucleus | 29.69 | 38.16 |
| CDX79357 | Canola | nucleus | 29.35 | 38.05 |
| CDX97070 | Canola | nucleus | 31.4 | 38.02 |
| CDX67963 | Canola | nucleus | 29.01 | 37.61 |
| KRH09666 | Soybean | nucleus | 34.13 | 37.59 |
| CDY71759 | Canola | nucleus | 29.01 | 37.44 |
| CDX88160 | Canola | nucleus | 31.06 | 36.99 |
| Bra009822.1-P | Field mustard | nucleus | 31.4 | 36.22 |
| CDX87097 | Canola | plastid | 17.06 | 35.97 |
| KRH02887 | Soybean | nucleus | 19.8 | 35.8 |
| CDY19813 | Canola | nucleus | 30.72 | 35.43 |
| Bra036535.1-P | Field mustard | nucleus | 30.72 | 35.43 |
| KRH19009 | Soybean | nucleus | 19.8 | 35.37 |
| AT5G10970.1 | Thale cress | nucleus | 32.76 | 35.29 |
| KRH47378 | Soybean | nucleus | 30.72 | 34.48 |
| KRH35714 | Soybean | nucleus | 18.77 | 29.26 |
| KRH57480 | Soybean | nucleus | 19.8 | 29.15 |
| KRH17304 | Soybean | nucleus | 24.57 | 28.02 |
| KRH04587 | Soybean | cytosol | 18.77 | 27.78 |
| KRH58019 | Soybean | nucleus | 18.77 | 27.64 |
| KRH72952 | Soybean | nucleus | 24.23 | 27.63 |
| KRH58613 | Soybean | nucleus | 23.21 | 27.31 |
| KRG91058 | Soybean | nucleus | 17.75 | 27.23 |
| KRH42519 | Soybean | nucleus | 23.21 | 27.09 |
| KRG89273 | Soybean | nucleus | 21.84 | 26.89 |
| KRG97966 | Soybean | nucleus | 22.87 | 26.69 |
| KRH04497 | Soybean | nucleus | 18.77 | 26.19 |
| TraesCS5D01G354900.1 | Wheat | nucleus | 19.8 | 26.13 |
| KRH30916 | Soybean | nucleus | 22.18 | 26.1 |
| TraesCS6D01G135200.1 | Wheat | nucleus | 15.36 | 26.01 |
| OQU84499 | Sorghum | nucleus | 17.06 | 25.64 |
| TraesCS3B01G560300.1 | Wheat | nucleus | 21.84 | 25.2 |
| HORVU0Hr1G015760.1 | Barley | nucleus | 15.02 | 25.14 |
| TraesCS3D01G505300.1 | Wheat | nucleus | 21.84 | 24.81 |
| TraesCS3A01G497500.1 | Wheat | nucleus | 21.84 | 24.62 |
| TraesCS5D01G355400.1 | Wheat | nucleus | 20.14 | 24.38 |
| TraesCS6A01G145900.1 | Wheat | nucleus | 15.36 | 24.32 |
| KRH49708 | Soybean | nucleus | 20.82 | 24.02 |
| Os02t0182300-00 | Rice | cytosol, mitochondrion, peroxisome | 15.36 | 23.2 |
| Zm00001d015525_P001 | Maize | nucleus | 12.97 | 21.71 |
| EES00097 | Sorghum | nucleus | 21.84 | 21.62 |
| Zm00001d050143_P001 | Maize | nucleus | 20.48 | 21.2 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | UniProt:A0A0R0JJ42 | EMBL:ACUP02003419 | EnsemblPlantsGene:GLYMA_06G063700 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:IPR013087 | EnsemblPlants:KRH52363 | ProteinID:KRH52363 | ProteinID:KRH52363.1 | ScanProsite:PS00028 | PFscan:PS50157 |
| PANTHER:PTHR26374 | PANTHER:PTHR26374:SF217 | SUPFAM:SSF57667 | UniParc:UPI00023C3042 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:4835670..4836848
Molecular Weight (calculated)
32270.0 Da
IEP (calculated)
8.805
GRAVY (calculated)
-0.663
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLPITRARG EYSAMETLSH ESPFYDNNLS AEKTPPSPST PLQNPQEKKQ LSVKEQEEAK TDTLLDLNAS GDDSAVGCSP VLNLITCLDT DLPSTSSENQ
101: HGSEPRVFSC NYCQRKFYSS QALGGHQNAH RRERSITKRG HHRSGSRGMM ASATTAFGIP FLHNHLHHYA TMASLPLHGG CSNNKPLGIK AHSIIHKPSS
201: NSSHISFNGF GTTFGHHGWS RPLIDQQPRI GKLTMESCHK TSRGNVGKFD AVKTTMINSA TIEEISGYNM ISGVTRFKTN QEEMKHLDLS LKL
101: HGSEPRVFSC NYCQRKFYSS QALGGHQNAH RRERSITKRG HHRSGSRGMM ASATTAFGIP FLHNHLHHYA TMASLPLHGG CSNNKPLGIK AHSIIHKPSS
201: NSSHISFNGF GTTFGHHGWS RPLIDQQPRI GKLTMESCHK TSRGNVGKFD AVKTTMINSA TIEEISGYNM ISGVTRFKTN QEEMKHLDLS LKL
001: MEPSIKGDQE MLKIKKQGHQ DLELGLTLLS RGTATSSELN LIDSFKTSSS STSHHQHQQE QLADPRVFSC NYCQRKFYSS QALGGHQNAH KRERTLAKRG
101: QYYKMTLSSL PSSAFAFGHG SVSRFASMAS LPLHGSVNNR STLGIQAHST IHKPSFLGRQ TTSLSHVFKQ SIHQKPTIGK MLPEKFHLEV AGNNNSNMVA
201: AKLERIGHFK SNQEDHNQFK KIDLTLKL
101: QYYKMTLSSL PSSAFAFGHG SVSRFASMAS LPLHGSVNNR STLGIQAHST IHKPSFLGRQ TTSLSHVFKQ SIHQKPTIGK MLPEKFHLEV AGNNNSNMVA
201: AKLERIGHFK SNQEDHNQFK KIDLTLKL
Arabidopsis Description
ZFP1At1g80730 [Source:UniProtKB/TrEMBL;Acc:Q0V814]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.