Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH42519 | Soybean | nucleus | 95.58 | 94.82 |
KRG89273 | Soybean | nucleus | 64.26 | 67.23 |
KRH49708 | Soybean | nucleus | 64.26 | 62.99 |
KRH04587 | Soybean | cytosol | 49.0 | 61.62 |
PGSC0003DMT400075890 | Potato | nucleus | 33.73 | 58.74 |
PGSC0003DMT400058615 | Potato | nucleus | 57.03 | 56.8 |
Solyc01g005130.2.1 | Tomato | nucleus | 56.63 | 56.4 |
PGSC0003DMT400075898 | Potato | nucleus | 51.0 | 54.04 |
PGSC0003DMT400075895 | Potato | nucleus | 51.0 | 54.04 |
KRH72952 | Soybean | nucleus | 50.2 | 48.64 |
KRH17304 | Soybean | nucleus | 49.8 | 48.25 |
KRG97966 | Soybean | nucleus | 46.99 | 46.61 |
GSMUA_Achr6P11350_001 | Banana | nucleus | 38.15 | 42.79 |
KRH30916 | Soybean | nucleus | 42.57 | 42.57 |
AT1G66140.1 | Thale cress | nucleus | 42.17 | 40.38 |
CDY07483 | Canola | nucleus | 38.96 | 39.43 |
Bra004148.1-P | Field mustard | nucleus | 39.36 | 38.58 |
CDY65468 | Canola | nucleus | 40.56 | 38.55 |
Bra039750.1-P | Field mustard | nucleus | 40.56 | 38.55 |
CDY50321 | Canola | nucleus | 40.56 | 37.83 |
KRH02887 | Soybean | nucleus | 22.09 | 33.95 |
KRH19009 | Soybean | nucleus | 22.09 | 33.54 |
Zm00001d047968_P001 | Maize | nucleus | 28.51 | 33.49 |
Zm00001d028371_P001 | Maize | nucleus | 28.51 | 32.42 |
CDY39248 | Canola | cytosol | 20.88 | 32.1 |
Os03t0239300-01 | Rice | nucleus | 30.52 | 31.67 |
EER92577 | Sorghum | cytosol, mitochondrion, nucleus | 28.92 | 31.44 |
HORVU4Hr1G064150.1 | Barley | plastid | 29.72 | 31.22 |
TraesCS4D01G230300.1 | Wheat | nucleus | 27.31 | 31.19 |
TraesCS4B01G229200.1 | Wheat | nucleus | 29.72 | 30.45 |
TraesCS4A01G073200.1 | Wheat | nucleus | 29.32 | 30.17 |
KRH57480 | Soybean | nucleus | 24.1 | 30.15 |
KRG91058 | Soybean | nucleus | 22.49 | 29.32 |
KRH35714 | Soybean | nucleus | 22.09 | 29.26 |
KRH23633 | Soybean | nucleus | 26.1 | 28.51 |
KRH44531 | Soybean | nucleus | 25.7 | 28.44 |
KRH58019 | Soybean | nucleus | 22.49 | 28.14 |
KRH04497 | Soybean | nucleus | 22.49 | 26.67 |
KRH09666 | Soybean | nucleus | 27.31 | 25.56 |
KRH61695 | Soybean | nucleus | 27.71 | 24.56 |
KRH47378 | Soybean | nucleus | 25.7 | 24.52 |
HORVU0Hr1G008920.1 | Barley | mitochondrion | 7.23 | 23.68 |
KRH52363 | Soybean | nucleus | 27.31 | 23.21 |
KRH15782 | Soybean | nucleus | 27.71 | 22.12 |
KRH05270 | Soybean | nucleus | 26.91 | 20.43 |
Protein Annotations
EntrezGene:100775305 | MapMan:15.5.15 | Gene3D:3.30.160.60 | UniProt:A0A0R0JV43 | EMBL:ACUP02003275 | EnsemblPlantsGene:GLYMA_05G139000 |
GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | ProteinID:KRH58612.1 | EnsemblPlants:KRH58613 |
ProteinID:KRH58613 | ProteinID:KRH58613.1 | ProteinID:KRH58614.1 | ProteinID:KRH58615.1 | ScanProsite:PS00028 | PFscan:PS50157 |
PANTHER:PTHR26374 | PANTHER:PTHR26374:SF313 | SUPFAM:SSF57667 | UniParc:UPI00054A28C6 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:33145106..33150599
Molecular Weight (calculated)
26771.2 Da
IEP (calculated)
7.347
GRAVY (calculated)
-0.507
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTPNLNLEP ENHSEGSSQV ASNVSFHEAS HDLKKGSTTT SSCLTKDETD PGSITLDLTL NFNSGDGELK GSSDASSEVG AEAPASASAT PRVFSCNYCR
101: RKFYSSQALG GHQNAHKRER TMAKRAMRMG MFTERYTSLA SLPLHGSPFR SLGLEAHSAM HRRHVPSSAA ALRAPDMRAA AKFERNQFGS LVFVEDDDVG
201: FFWPGSFRQV DQQGAGVNVG HAQSSNASLI PMVPPPPQAS TSPDLTLKL
101: RKFYSSQALG GHQNAHKRER TMAKRAMRMG MFTERYTSLA SLPLHGSPFR SLGLEAHSAM HRRHVPSSAA ALRAPDMRAA AKFERNQFGS LVFVEDDDVG
201: FFWPGSFRQV DQQGAGVNVG HAQSSNASLI PMVPPPPQAS TSPDLTLKL
001: MRPILDLEIE ASSGSSSSQV ASNLSPVGED YKPISLNLSL SFNNNNNNNL DLESSSLTLP LSSTSESSNP EQQQQQQPSV SKRVFSCNYC QRKFYSSQAL
101: GGHQNAHKRE RTLAKRAMRM GLAGVFPGRG SSSNYAAAAT AAALSCLPLH GSGNGNMTSF RTLGIRAHSS AHDVSMTRQT PETLIRNIAR FNQGYFGNCI
201: PFYVEDDEAE MLWPGSFRQA TNAVAVEAGN DNLGERKMDF LDVKQAMDME SSLPDLTLKL
101: GGHQNAHKRE RTLAKRAMRM GLAGVFPGRG SSSNYAAAAT AAALSCLPLH GSGNGNMTSF RTLGIRAHSS AHDVSMTRQT PETLIRNIAR FNQGYFGNCI
201: PFYVEDDEAE MLWPGSFRQA TNAVAVEAGN DNLGERKMDF LDVKQAMDME SSLPDLTLKL
Arabidopsis Description
ZFP4Zinc finger protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q39263]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.