Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400075890 | Potato | nucleus | 29.73 | 46.15 |
| KRH72952 | Soybean | nucleus | 48.2 | 41.63 |
| VIT_01s0011g06200.t01 | Wine grape | nucleus | 45.95 | 41.46 |
| PGSC0003DMT400060730 | Potato | nucleus | 43.69 | 41.1 |
| Solyc11g011890.1.1 | Tomato | nucleus | 45.5 | 41.06 |
| Solyc04g014540.1.1 | Tomato | nucleus | 42.79 | 40.95 |
| PGSC0003DMT400034689 | Potato | nucleus | 45.5 | 40.89 |
| KRH17304 | Soybean | nucleus | 47.3 | 40.86 |
| PGSC0003DMT400075898 | Potato | nucleus | 42.79 | 40.43 |
| PGSC0003DMT400075895 | Potato | nucleus | 41.89 | 39.57 |
| KRH04587 | Soybean | cytosol | 35.14 | 39.39 |
| KRG89273 | Soybean | nucleus | 40.99 | 38.24 |
| CDY07483 | Canola | nucleus | 42.34 | 38.21 |
| KRH58613 | Soybean | nucleus | 42.79 | 38.15 |
| AT1G66140.1 | Thale cress | nucleus | 44.59 | 38.08 |
| KRG97966 | Soybean | nucleus | 42.34 | 37.45 |
| Bra004148.1-P | Field mustard | nucleus | 42.79 | 37.4 |
| PGSC0003DMT400058615 | Potato | nucleus | 41.89 | 37.2 |
| KRH42519 | Soybean | nucleus | 41.89 | 37.05 |
| Solyc01g005130.2.1 | Tomato | nucleus | 40.99 | 36.4 |
| Bra039750.1-P | Field mustard | nucleus | 42.79 | 36.26 |
| CDY65468 | Canola | nucleus | 42.79 | 36.26 |
| GSMUA_Achr10P... | Banana | nucleus | 33.78 | 36.23 |
| CDY50321 | Canola | nucleus | 42.79 | 35.58 |
| GSMUA_Achr4P03360_001 | Banana | nucleus | 28.83 | 35.56 |
| KRH30916 | Soybean | nucleus | 39.64 | 35.34 |
| KRH49708 | Soybean | nucleus | 40.09 | 35.04 |
| GSMUA_Achr10P... | Banana | nucleus | 26.13 | 31.87 |
| GSMUA_Achr4P10880_001 | Banana | nucleus | 24.77 | 29.41 |
| GSMUA_Achr6P24010_001 | Banana | nucleus | 22.52 | 28.74 |
| GSMUA_Achr6P01990_001 | Banana | nucleus | 28.38 | 25.4 |
| CDY39248 | Canola | cytosol | 18.47 | 25.31 |
| GSMUA_Achr5P22810_001 | Banana | nucleus | 27.93 | 24.12 |
| GSMUA_Achr2P05140_001 | Banana | nucleus | 26.13 | 22.92 |
| GSMUA_Achr8P29430_001 | Banana | nucleus | 25.68 | 22.18 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009719 | GO:GO:0009788 |
| GO:GO:0009987 | GO:GO:0019748 | GO:GO:0019760 | GO:GO:0043565 | GO:GO:0044212 | EnsemblPlantsGene:GSMUA_Achr6G11350_001 |
| EnsemblPlants:GSMUA_Achr6P11350_001 | EnsemblPlants:GSMUA_Achr6T11350_001 | InterPro:IPR013087 | UniProt:M0T633 | ScanProsite:PS00028 | PFscan:PS50157 |
| PANTHER:PTHR26374 | PANTHER:PTHR26374:SF239 | SUPFAM:SSF57667 | UniParc:UPI0002963CAD | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| SEG:seg | : | : | : | : | : |
Description
Putative ZOS3-07 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G11350_001]
Coordinates
chr6:+:7529128..7529796
Molecular Weight (calculated)
24201.0 Da
IEP (calculated)
6.024
GRAVY (calculated)
-0.457
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGSDTEASV EVFEVSSQVA SNMWTQESSS SSPSKEDAPI SLDLSLTLNA ESTAPAVVSL SSTSESSSES QAFPRPDSRR VFSCNYCQRK FFSSQALGGH
101: QNAHKRERTL AKRALRLDAA RHSYPSIASL PLHGSALHSL AIKAHSSAHQ SMVEWRGSQG GMLFGRGLLE PRQVVVEDQD VDFHWPGSFG PMTDSRFERI
201: GSSDLVAVDH QPVEDPDLTL RL
101: QNAHKRERTL AKRALRLDAA RHSYPSIASL PLHGSALHSL AIKAHSSAHQ SMVEWRGSQG GMLFGRGLLE PRQVVVEDQD VDFHWPGSFG PMTDSRFERI
201: GSSDLVAVDH QPVEDPDLTL RL
001: MRPILDLEIE ASSGSSSSQV ASNLSPVGED YKPISLNLSL SFNNNNNNNL DLESSSLTLP LSSTSESSNP EQQQQQQPSV SKRVFSCNYC QRKFYSSQAL
101: GGHQNAHKRE RTLAKRAMRM GLAGVFPGRG SSSNYAAAAT AAALSCLPLH GSGNGNMTSF RTLGIRAHSS AHDVSMTRQT PETLIRNIAR FNQGYFGNCI
201: PFYVEDDEAE MLWPGSFRQA TNAVAVEAGN DNLGERKMDF LDVKQAMDME SSLPDLTLKL
101: GGHQNAHKRE RTLAKRAMRM GLAGVFPGRG SSSNYAAAAT AAALSCLPLH GSGNGNMTSF RTLGIRAHSS AHDVSMTRQT PETLIRNIAR FNQGYFGNCI
201: PFYVEDDEAE MLWPGSFRQA TNAVAVEAGN DNLGERKMDF LDVKQAMDME SSLPDLTLKL
Arabidopsis Description
ZFP4Zinc finger protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q39263]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.