Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG89273 | Soybean | nucleus | 76.38 | 81.51 |
| KRH04587 | Soybean | cytosol | 60.24 | 77.27 |
| KRH58613 | Soybean | nucleus | 62.99 | 64.26 |
| KRH42519 | Soybean | nucleus | 61.81 | 62.55 |
| PGSC0003DMT400075890 | Potato | nucleus | 30.71 | 54.55 |
| PGSC0003DMT400075898 | Potato | nucleus | 45.28 | 48.94 |
| PGSC0003DMT400075895 | Potato | nucleus | 45.28 | 48.94 |
| PGSC0003DMT400058615 | Potato | nucleus | 47.64 | 48.4 |
| Solyc01g005130.2.1 | Tomato | nucleus | 46.85 | 47.6 |
| KRH72952 | Soybean | nucleus | 47.24 | 46.69 |
| KRH17304 | Soybean | nucleus | 46.85 | 46.3 |
| KRG97966 | Soybean | nucleus | 44.09 | 44.62 |
| KRH30916 | Soybean | nucleus | 40.55 | 41.37 |
| GSMUA_Achr6P11350_001 | Banana | nucleus | 35.04 | 40.09 |
| CDY65468 | Canola | nucleus | 39.37 | 38.17 |
| Bra039750.1-P | Field mustard | nucleus | 39.37 | 38.17 |
| CDY07483 | Canola | nucleus | 36.61 | 37.8 |
| CDY50321 | Canola | nucleus | 39.37 | 37.45 |
| AT1G66140.1 | Thale cress | nucleus | 38.19 | 37.31 |
| Bra004148.1-P | Field mustard | nucleus | 37.01 | 37.01 |
| Zm00001d047968_P001 | Maize | nucleus | 27.56 | 33.02 |
| Zm00001d028371_P001 | Maize | nucleus | 26.38 | 30.59 |
| CDY39248 | Canola | cytosol | 19.29 | 30.25 |
| EER92577 | Sorghum | cytosol, mitochondrion, nucleus | 27.17 | 30.13 |
| Os03t0239300-01 | Rice | nucleus | 28.35 | 30.0 |
| TraesCS4D01G230300.1 | Wheat | nucleus | 25.59 | 29.82 |
| KRH02887 | Soybean | nucleus | 18.9 | 29.63 |
| HORVU4Hr1G064150.1 | Barley | plastid | 27.56 | 29.54 |
| TraesCS4A01G073200.1 | Wheat | nucleus | 27.56 | 28.93 |
| KRH19009 | Soybean | nucleus | 18.5 | 28.66 |
| TraesCS4B01G229200.1 | Wheat | nucleus | 27.17 | 28.4 |
| KRH57480 | Soybean | nucleus | 22.05 | 28.14 |
| KRH35714 | Soybean | nucleus | 20.47 | 27.66 |
| KRG91058 | Soybean | nucleus | 20.47 | 27.23 |
| KRH58019 | Soybean | nucleus | 20.87 | 26.63 |
| KRH23633 | Soybean | nucleus | 23.62 | 26.32 |
| KRH44531 | Soybean | nucleus | 23.23 | 26.22 |
| KRH04497 | Soybean | nucleus | 20.87 | 25.24 |
| KRH09666 | Soybean | nucleus | 24.8 | 23.68 |
| KRH47378 | Soybean | nucleus | 23.62 | 22.99 |
| KRH61695 | Soybean | nucleus | 23.62 | 21.35 |
| KRH52363 | Soybean | nucleus | 24.02 | 20.82 |
| KRH15782 | Soybean | nucleus | 24.02 | 19.55 |
| HORVU0Hr1G008920.1 | Barley | mitochondrion | 5.51 | 18.42 |
| KRH05270 | Soybean | nucleus | 23.62 | 18.29 |
Protein Annotations
| EMBL:ACUP02004602 | EnsemblPlants:KRH49708 | EnsemblPlantsGene:GLYMA_07G174000 | EntrezGene:100777133 | Gene3D:3.30.160.60 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 |
| PANTHER:PTHR26374:SF313 | PFscan:PS50157 | ProteinID:KRH49708 | ProteinID:KRH49708.1 | ScanProsite:PS00028 | SEG:seg |
| SUPFAM:SSF57667 | UniParc:UPI0006EDE542 | UniProt:A0A0R0J4L4 | MapMan:15.5.15 | : | : |
Description
hypothetical protein
Coordinates
chr7:+:31241630..31248020
Molecular Weight (calculated)
27928.5 Da
IEP (calculated)
6.074
GRAVY (calculated)
-0.491
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTPNLNLEP EGGLKVLSQV GFDKSIQETS HDLTKDSTAT SSCLTKADPD PGSVSLDLSL NFNPNDEELK GTSDTNCEVG PETHASASAI PRVFSCNYCQ
101: RKFFSSQALG GHQNAHKRER TMAKRAMRMG MFAERYTSLA SLPLHGSAFR SLGLEAHAAM HQGHVHHSMR APDMSAAAKF GKDYFRTPIF VEDDDVGLFW
201: PGSFRQIDER GYVNLRHGFE ELGECSSEDF LSSHAASSSF ASAETAFRFG EVQY
101: RKFFSSQALG GHQNAHKRER TMAKRAMRMG MFAERYTSLA SLPLHGSAFR SLGLEAHAAM HQGHVHHSMR APDMSAAAKF GKDYFRTPIF VEDDDVGLFW
201: PGSFRQIDER GYVNLRHGFE ELGECSSEDF LSSHAASSSF ASAETAFRFG EVQY
001: MRPILDLEIE ASSGSSSSQV ASNLSPVGED YKPISLNLSL SFNNNNNNNL DLESSSLTLP LSSTSESSNP EQQQQQQPSV SKRVFSCNYC QRKFYSSQAL
101: GGHQNAHKRE RTLAKRAMRM GLAGVFPGRG SSSNYAAAAT AAALSCLPLH GSGNGNMTSF RTLGIRAHSS AHDVSMTRQT PETLIRNIAR FNQGYFGNCI
201: PFYVEDDEAE MLWPGSFRQA TNAVAVEAGN DNLGERKMDF LDVKQAMDME SSLPDLTLKL
101: GGHQNAHKRE RTLAKRAMRM GLAGVFPGRG SSSNYAAAAT AAALSCLPLH GSGNGNMTSF RTLGIRAHSS AHDVSMTRQT PETLIRNIAR FNQGYFGNCI
201: PFYVEDDEAE MLWPGSFRQA TNAVAVEAGN DNLGERKMDF LDVKQAMDME SSLPDLTLKL
Arabidopsis Description
ZFP4Zinc finger protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q39263]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.