Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47378 | Soybean | nucleus | 90.22 | 77.78 |
| KRH23633 | Soybean | nucleus | 63.56 | 62.72 |
| KRH09666 | Soybean | nucleus | 66.22 | 56.02 |
| PGSC0003DMT400036628 | Potato | nucleus | 41.78 | 42.34 |
| VIT_09s0002g09080.t01 | Wine grape | nucleus | 50.22 | 42.32 |
| Solyc03g117070.1.1 | Tomato | nucleus | 42.22 | 41.48 |
| Bra035157.1-P | Field mustard | nucleus | 35.56 | 37.38 |
| AT1G80730.1 | Thale cress | nucleus | 37.33 | 36.84 |
| Bra008445.1-P | Field mustard | nucleus | 35.11 | 36.41 |
| AT5G25160.1 | Thale cress | nucleus | 37.78 | 36.17 |
| CDY39947 | Canola | nucleus | 35.11 | 35.91 |
| CDX87338 | Canola | nucleus | 35.56 | 35.71 |
| Bra003582.1-P | Field mustard | nucleus | 34.22 | 35.65 |
| GSMUA_Achr2P05140_001 | Banana | nucleus | 40.0 | 35.57 |
| KRH02887 | Soybean | nucleus | 25.33 | 35.19 |
| CDY66132 | Canola | nucleus | 35.56 | 35.09 |
| CDX79357 | Canola | nucleus | 34.67 | 34.51 |
| CDY71759 | Canola | nucleus | 34.67 | 34.36 |
| CDX69795 | Canola | nucleus | 36.89 | 34.3 |
| Bra009000.1-P | Field mustard | nucleus | 36.89 | 34.3 |
| CDY05474 | Canola | nucleus | 37.78 | 34.27 |
| Bra020486.1-P | Field mustard | nucleus | 37.78 | 34.27 |
| CDY05377 | Canola | nucleus | 37.33 | 33.87 |
| CDX67963 | Canola | nucleus | 33.78 | 33.63 |
| KRH19009 | Soybean | nucleus | 24.44 | 33.54 |
| CDX97070 | Canola | nucleus | 36.0 | 33.47 |
| KRH61695 | Soybean | nucleus | 41.78 | 33.45 |
| CDX88160 | Canola | nucleus | 36.44 | 33.33 |
| AT5G10970.1 | Thale cress | nucleus | 39.56 | 32.72 |
| Bra009822.1-P | Field mustard | nucleus | 36.44 | 32.28 |
| GSMUA_Achr5P22810_001 | Banana | nucleus | 36.44 | 31.91 |
| CDY19813 | Canola | nucleus | 35.56 | 31.5 |
| Bra036535.1-P | Field mustard | nucleus | 35.56 | 31.5 |
| KRH15782 | Soybean | nucleus | 42.67 | 30.77 |
| KRH52363 | Soybean | nucleus | 39.56 | 30.38 |
| TraesCS6D01G135200.1 | Wheat | nucleus | 23.11 | 30.06 |
| GSMUA_Achr6P01990_001 | Banana | nucleus | 32.89 | 29.84 |
| CDX87097 | Canola | plastid | 18.22 | 29.5 |
| KRH35714 | Soybean | nucleus | 24.44 | 29.26 |
| TraesCS6A01G145900.1 | Wheat | nucleus | 24.0 | 29.19 |
| GSMUA_Achr8P29430_001 | Banana | nucleus | 33.33 | 29.18 |
| HORVU0Hr1G015760.1 | Barley | nucleus | 22.67 | 29.14 |
| KRH05270 | Soybean | nucleus | 41.33 | 28.35 |
| KRG91058 | Soybean | nucleus | 23.56 | 27.75 |
| KRH17304 | Soybean | nucleus | 31.11 | 27.24 |
| KRH58019 | Soybean | nucleus | 24.0 | 27.14 |
| KRH72952 | Soybean | nucleus | 30.67 | 26.85 |
| KRG97966 | Soybean | nucleus | 28.89 | 25.9 |
| KRH58613 | Soybean | nucleus | 28.44 | 25.7 |
| KRH04587 | Soybean | cytosol | 22.22 | 25.25 |
| KRG89273 | Soybean | nucleus | 26.67 | 25.21 |
| KRH57480 | Soybean | nucleus | 22.22 | 25.13 |
| KRH42519 | Soybean | nucleus | 28.0 | 25.1 |
| TraesCS5D01G354900.1 | Wheat | nucleus | 24.44 | 24.77 |
| OQU84499 | Sorghum | nucleus | 21.33 | 24.62 |
| KRH30916 | Soybean | nucleus | 27.11 | 24.5 |
| KRH04497 | Soybean | nucleus | 22.67 | 24.29 |
| Os02t0182300-00 | Rice | cytosol, mitochondrion, peroxisome | 20.44 | 23.71 |
| KRH49708 | Soybean | nucleus | 26.22 | 23.23 |
| TraesCS5D01G355400.1 | Wheat | nucleus | 24.89 | 23.14 |
| TraesCS3D01G505300.1 | Wheat | nucleus | 25.78 | 22.48 |
| TraesCS3B01G560300.1 | Wheat | nucleus | 25.33 | 22.44 |
| EES00097 | Sorghum | nucleus | 28.44 | 21.62 |
| TraesCS3A01G497500.1 | Wheat | nucleus | 24.89 | 21.54 |
| Zm00001d015525_P001 | Maize | nucleus | 16.0 | 20.57 |
| Zm00001d050143_P001 | Maize | nucleus | 25.33 | 20.14 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | UniProt:A0A0R0IVR3 | EMBL:ACUP02004936 | EnsemblPlantsGene:GLYMA_08G217100 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:IPR013087 | EnsemblPlants:KRH44531 | ProteinID:KRH44531 | ProteinID:KRH44531.1 | ScanProsite:PS00028 | PFscan:PS50157 |
| PANTHER:PTHR26374 | PANTHER:PTHR26374:SF258 | SUPFAM:SSF57667 | UniParc:UPI0006EDD711 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:17619224..17619901
Molecular Weight (calculated)
25114.3 Da
IEP (calculated)
8.712
GRAVY (calculated)
-0.718
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDQKHQHDS VPRVLLDLSL SSNKDSGDDN SKLKPELNLL NCFHTNFSEN SSESSQGNEL DPRVFSCNYC QRKFYSSQAL GGHQNAHKRE RTLARRGYKA
101: GAADFGHTYS NIHFLPSHGL YNKALGIQVH SMINKPSYQT PFFGLCRSNN GWQRQPLDSQ PAIGNFRVGA ETESSSLADS VPKLGKFSTR LVAEGFGGYC
201: FGSITTHLKS KQQEELQKLD LSLKL
101: GAADFGHTYS NIHFLPSHGL YNKALGIQVH SMINKPSYQT PFFGLCRSNN GWQRQPLDSQ PAIGNFRVGA ETESSSLADS VPKLGKFSTR LVAEGFGGYC
201: FGSITTHLKS KQQEELQKLD LSLKL
001: MDSSSGKPRS SDSSCIISAS TSLQFSDSPK LSLENYNIDT VAAQEEDDHD QKEGVEGIKL DLMLAGYDSS QPQLNQELNL LDCLETGVVT PSFNGSTSTE
101: QKLFSCNYCQ RTFYSSQALG GHQNAHKRER TLAKRGQRMA SAAAFGHPYG FAPVPFHGQY SNRTLGIQAH SMSHKPSSYN VYGGEYGQIN WSRIPLVQQP
201: AIAKLTSTEN HYNHHQMMIA PPLTSTCENI GRFDVGRIPV EFPTSELWQR GEELLKPAEE EKQKNLDLSL KL
101: QKLFSCNYCQ RTFYSSQALG GHQNAHKRER TLAKRGQRMA SAAAFGHPYG FAPVPFHGQY SNRTLGIQAH SMSHKPSSYN VYGGEYGQIN WSRIPLVQQP
201: AIAKLTSTEN HYNHHQMMIA PPLTSTCENI GRFDVGRIPV EFPTSELWQR GEELLKPAEE EKQKNLDLSL KL
Arabidopsis Description
C2H2 and C2HC zinc fingers superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LEU3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.