Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003582.1-P | Field mustard | nucleus | 78.51 | 82.87 |
| CDX67963 | Canola | nucleus | 82.02 | 82.74 |
| Bra008445.1-P | Field mustard | nucleus | 78.51 | 82.49 |
| CDY39947 | Canola | nucleus | 79.39 | 82.27 |
| CDY66132 | Canola | nucleus | 82.02 | 82.02 |
| CDX87338 | Canola | nucleus | 79.82 | 81.25 |
| CDX79357 | Canola | nucleus | 80.26 | 80.97 |
| CDY71759 | Canola | nucleus | 80.26 | 80.62 |
| Bra035157.1-P | Field mustard | nucleus | 75.44 | 80.37 |
| VIT_09s0002g09080.t01 | Wine grape | nucleus | 48.25 | 41.2 |
| AT5G25160.1 | Thale cress | nucleus | 39.91 | 38.72 |
| KRH23633 | Soybean | nucleus | 38.6 | 38.6 |
| KRH44531 | Soybean | nucleus | 36.84 | 37.33 |
| Solyc06g068390.1.1 | Tomato | nucleus | 27.63 | 35.59 |
| AT5G57520.1 | Thale cress | nucleus, plastid | 23.25 | 35.33 |
| PGSC0003DMT400073330 | Potato | nucleus | 31.14 | 35.32 |
| KRH61695 | Soybean | nucleus | 42.98 | 34.88 |
| KRH09666 | Soybean | nucleus | 39.91 | 34.21 |
| GSMUA_Achr2P05140_001 | Banana | nucleus | 37.72 | 33.99 |
| KRH47378 | Soybean | nucleus | 36.84 | 32.18 |
| KRH52363 | Soybean | nucleus | 41.23 | 32.08 |
| GSMUA_Achr8P29430_001 | Banana | nucleus | 35.53 | 31.52 |
| AT5G10970.1 | Thale cress | nucleus | 36.4 | 30.51 |
| KRH15782 | Soybean | nucleus | 41.67 | 30.45 |
| GSMUA_Achr5P22810_001 | Banana | nucleus | 34.21 | 30.35 |
| GSMUA_Achr6P01990_001 | Banana | nucleus | 31.58 | 29.03 |
| AT1G24625.1 | Thale cress | nucleus | 26.32 | 28.71 |
| KRH05270 | Soybean | nucleus | 41.23 | 28.66 |
| TraesCS6D01G135200.1 | Wheat | nucleus | 21.49 | 28.32 |
| TraesCS6A01G145900.1 | Wheat | nucleus | 22.37 | 27.57 |
| AT1G66140.1 | Thale cress | nucleus | 30.7 | 26.92 |
| HORVU0Hr1G015760.1 | Barley | nucleus | 20.61 | 26.86 |
| OQU84499 | Sorghum | nucleus | 21.93 | 25.64 |
| Os02t0182300-00 | Rice | cytosol, mitochondrion, peroxisome | 21.49 | 25.26 |
| TraesCS5D01G354900.1 | Wheat | nucleus | 24.12 | 24.77 |
| Zm00001d015525_P001 | Maize | nucleus | 16.67 | 21.71 |
| TraesCS3B01G560300.1 | Wheat | nucleus | 23.68 | 21.26 |
| TraesCS5D01G355400.1 | Wheat | nucleus | 22.37 | 21.07 |
| TraesCS3D01G505300.1 | Wheat | nucleus | 23.68 | 20.93 |
| TraesCS3A01G497500.1 | Wheat | nucleus | 23.68 | 20.77 |
| EES00097 | Sorghum | nucleus | 25.0 | 19.26 |
| Zm00001d050143_P001 | Maize | nucleus | 22.37 | 18.02 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:844412 | UniProt:A0A178W5F0 | ProteinID:AAA98913.1 | ProteinID:AAF14661.1 |
| ProteinID:AEE36441.1 | ArrayExpress:AT1G80730 | EnsemblPlantsGene:AT1G80730 | RefSeq:AT1G80730 | TAIR:AT1G80730 | RefSeq:AT1G80730-TAIR-G |
| EnsemblPlants:AT1G80730.1 | TAIR:AT1G80730.1 | EMBL:BT026406 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009640 | GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009788 |
| GO:GO:0009791 | GO:GO:0009987 | GO:GO:0046872 | InterPro:IPR013087 | EMBL:L39644 | RefSeq:NP_178188.1 |
| ProteinID:OAP13739.1 | PO:PO:0000230 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009032 | PO:PO:0009046 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF258 | UniProt:Q0V814 | UniProt:Q42485 |
| SUPFAM:SSF57667 | UniParc:UPI000013C3B2 | Symbol:ZFP1 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg |
Description
ZFP1At1g80730 [Source:UniProtKB/TrEMBL;Acc:Q0V814]
Coordinates
chr1:-:30339322..30340385
Molecular Weight (calculated)
25469.3 Da
IEP (calculated)
10.560
GRAVY (calculated)
-0.654
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPSIKGDQE MLKIKKQGHQ DLELGLTLLS RGTATSSELN LIDSFKTSSS STSHHQHQQE QLADPRVFSC NYCQRKFYSS QALGGHQNAH KRERTLAKRG
101: QYYKMTLSSL PSSAFAFGHG SVSRFASMAS LPLHGSVNNR STLGIQAHST IHKPSFLGRQ TTSLSHVFKQ SIHQKPTIGK MLPEKFHLEV AGNNNSNMVA
201: AKLERIGHFK SNQEDHNQFK KIDLTLKL
101: QYYKMTLSSL PSSAFAFGHG SVSRFASMAS LPLHGSVNNR STLGIQAHST IHKPSFLGRQ TTSLSHVFKQ SIHQKPTIGK MLPEKFHLEV AGNNNSNMVA
201: AKLERIGHFK SNQEDHNQFK KIDLTLKL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.