Factsheet for Bra008445.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66132	Canola	nucleus	98.16	93.42
CDY71759	Canola	nucleus	97.23	92.95
Bra035157.1-P	Field mustard	nucleus	82.03	83.18
Bra003582.1-P	Field mustard	nucleus	81.11	81.48
AT1G80730.1	Thale cress	nucleus	82.49	78.51
VIT_09s0002g09080.t01	Wine grape	nucleus	47.47	38.58
KRH23633	Soybean	nucleus	38.25	36.4
Bra006815.1-P	Field mustard	nucleus, plastid	24.42	35.33
Bra020437.1-P	Field mustard	nucleus, plastid	24.42	35.33
KRH44531	Soybean	nucleus	36.41	35.11
Bra020486.1-P	Field mustard	nucleus	39.63	34.68
Solyc06g068390.1.1	Tomato	nucleus	27.65	33.9
PGSC0003DMT400073330	Potato	nucleus	30.88	33.33
Bra009822.1-P	Field mustard	nucleus	38.71	33.07
GSMUA_Achr2P05140_001	Banana	nucleus	38.25	32.81
Bra009000.1-P	Field mustard	nucleus	36.41	32.64
KRH09666	Soybean	nucleus	39.63	32.33
KRH61695	Soybean	nucleus	41.47	32.03
Bra036535.1-P	Field mustard	nucleus	37.33	31.89
KRH47378	Soybean	nucleus	36.87	30.65
GSMUA_Achr8P29430_001	Banana	nucleus	35.02	29.57
KRH52363	Soybean	nucleus	39.17	29.01
GSMUA_Achr5P22810_001	Banana	nucleus	33.64	28.4
TraesCS6D01G135200.1	Wheat	nucleus	22.58	28.32
Bra012496.1-P	Field mustard	nucleus	27.19	27.7
TraesCS6A01G145900.1	Wheat	nucleus	23.5	27.57
KRH15782	Soybean	nucleus	39.63	27.56
HORVU0Hr1G015760.1	Barley	nucleus	22.12	27.43
GSMUA_Achr6P01990_001	Banana	nucleus	31.34	27.42
Bra004148.1-P	Field mustard	nucleus	31.8	27.17
Bra010975.1-P	Field mustard	nucleus	26.27	27.01
Bra039750.1-P	Field mustard	nucleus	31.8	26.34
KRH05270	Soybean	nucleus	39.63	26.22
OQU84499	Sorghum	nucleus	23.04	25.64
Os02t0182300-00	Rice	cytosol, mitochondrion, peroxisome	22.12	24.74
TraesCS5D01G354900.1	Wheat	nucleus	22.58	22.07
Zm00001d015525_P001	Maize	nucleus	17.05	21.14
TraesCS5D01G355400.1	Wheat	nucleus	22.58	20.25
TraesCS3B01G560300.1	Wheat	nucleus	23.04	19.68
TraesCS3D01G505300.1	Wheat	nucleus	23.04	19.38
TraesCS3A01G497500.1	Wheat	nucleus	23.04	19.23
EES00097	Sorghum	nucleus	25.81	18.92
Zm00001d050143_P001	Maize	nucleus	22.58	17.31

Protein Annotations

EnsemblPlants:Bra008445.1	EnsemblPlants:Bra008445.1-P	EnsemblPlantsGene:Bra008445	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF258
PFscan:PS50157	ScanProsite:PS00028	SEG:seg	SUPFAM:SSF57667	UniParc:UPI0002546A6E	UniProt:M4CW48
MapMan:15.5.15	:	:	:	:	:

Description

AT1G80730 (E=4e-085) ZFP1, ATZFP1 | ZFP1 (ZINC-FINGER PROTEIN 1); nucleic acid binding / transcription factor/ zinc ion binding

Coordinates

chrA02:+:15673469..15674122

Molecular Weight (calculated)

24458.8 Da

IEP (calculated)

10.463

GRAVY (calculated)

-0.687

Length

217 amino acids

Sequence
(BLAST)

001: MLKIEKRGHQ DLDLGLTLFR GTTSSEFNLI DSFKSSSSST SHHLHNHQEH LEDPRVFSCN YCQRKFYSSQ ALGGHQNAHK RERTLAKRGK YYKMSLSSSP
101: PSSAFAFGYG SVSRFASMAS LPLHGSTSNR STLGIQAHST IHNPVLGRQR ASLSHVFKQN VHQRPAIGKM LPEKFHLEVA SSNNSNFTAP ELERIGYFKN
201: KQEDHNQFSK IDLTLKL

Best Arabidopsis Sequence Match ( AT1G80730.1 )
(BLAST)

001: MEPSIKGDQE MLKIKKQGHQ DLELGLTLLS RGTATSSELN LIDSFKTSSS STSHHQHQQE QLADPRVFSC NYCQRKFYSS QALGGHQNAH KRERTLAKRG
101: QYYKMTLSSL PSSAFAFGHG SVSRFASMAS LPLHGSVNNR STLGIQAHST IHKPSFLGRQ TTSLSHVFKQ SIHQKPTIGK MLPEKFHLEV AGNNNSNMVA
201: AKLERIGHFK SNQEDHNQFK KIDLTLKL

Arabidopsis Description

ZFP1At1g80730 [Source:UniProtKB/TrEMBL;Acc:Q0V814]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.