Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400036628 | Potato | nucleus | 46.07 | 55.41 |
| Solyc03g117070.1.1 | Tomato | nucleus | 46.07 | 53.71 |
| VIT_04s0008g05930.t01 | Wine grape | nucleus | 56.93 | 53.15 |
| KRH23633 | Soybean | nucleus | 44.94 | 52.63 |
| KRH44531 | Soybean | nucleus | 42.32 | 50.22 |
| AT1G80730.1 | Thale cress | nucleus | 41.2 | 48.25 |
| Bra008445.1-P | Field mustard | nucleus | 38.58 | 47.47 |
| KRH09666 | Soybean | nucleus | 46.82 | 46.99 |
| CDY66132 | Canola | nucleus | 40.07 | 46.93 |
| Bra003582.1-P | Field mustard | nucleus | 37.83 | 46.76 |
| Bra035157.1-P | Field mustard | nucleus | 37.45 | 46.73 |
| KRH47378 | Soybean | nucleus | 44.94 | 45.98 |
| CDY71759 | Canola | nucleus | 38.95 | 45.81 |
| CDY05377 | Canola | nucleus | 42.32 | 45.56 |
| CDY39947 | Canola | nucleus | 37.45 | 45.45 |
| CDX79357 | Canola | nucleus | 38.2 | 45.13 |
| AT5G25160.1 | Thale cress | nucleus | 39.7 | 45.11 |
| CDX87338 | Canola | nucleus | 37.83 | 45.09 |
| VIT_11s0052g01120.t01 | Wine grape | nucleus | 25.84 | 44.81 |
| CDY05474 | Canola | nucleus | 41.57 | 44.76 |
| Bra020486.1-P | Field mustard | nucleus | 41.57 | 44.76 |
| CDX67963 | Canola | nucleus | 37.83 | 44.69 |
| CDX97070 | Canola | nucleus | 39.7 | 43.8 |
| Bra009000.1-P | Field mustard | nucleus | 39.33 | 43.39 |
| CDX69795 | Canola | nucleus | 39.33 | 43.39 |
| CDX88160 | Canola | nucleus | 38.95 | 42.28 |
| GSMUA_Achr2P05140_001 | Banana | nucleus | 39.7 | 41.9 |
| AT5G10970.1 | Thale cress | nucleus | 42.32 | 41.54 |
| Bra009822.1-P | Field mustard | nucleus | 39.33 | 41.34 |
| Bra036535.1-P | Field mustard | nucleus | 38.2 | 40.16 |
| CDY19813 | Canola | nucleus | 38.2 | 40.16 |
| CDX87097 | Canola | plastid | 20.6 | 39.57 |
| GSMUA_Achr5P22810_001 | Banana | nucleus | 37.83 | 39.3 |
| VIT_07s0129g00670.t01 | Wine grape | nucleus | 26.97 | 37.31 |
| GSMUA_Achr6P01990_001 | Banana | nucleus | 34.46 | 37.1 |
| GSMUA_Achr8P29430_001 | Banana | nucleus | 34.08 | 35.41 |
| VIT_01s0011g06200.t01 | Wine grape | nucleus | 31.46 | 34.15 |
| VIT_03s0091g00260.t01 | Wine grape | nucleus | 23.97 | 33.86 |
| VIT_18s0001g09590.t01 | Wine grape | nucleus | 23.6 | 32.64 |
| TraesCS6D01G135200.1 | Wheat | nucleus | 19.48 | 30.06 |
| TraesCS6A01G145900.1 | Wheat | nucleus | 20.22 | 29.19 |
| HORVU0Hr1G015760.1 | Barley | nucleus | 18.73 | 28.57 |
| TraesCS5D01G354900.1 | Wheat | nucleus | 23.6 | 28.38 |
| OQU84499 | Sorghum | nucleus | 20.22 | 27.69 |
| TraesCS5D01G355400.1 | Wheat | nucleus | 24.34 | 26.86 |
| TraesCS3B01G560300.1 | Wheat | nucleus | 25.47 | 26.77 |
| TraesCS3D01G505300.1 | Wheat | nucleus | 25.47 | 26.36 |
| Os02t0182300-00 | Rice | cytosol, mitochondrion, peroxisome | 19.1 | 26.29 |
| TraesCS3A01G497500.1 | Wheat | nucleus | 24.72 | 25.38 |
| EES00097 | Sorghum | nucleus | 26.97 | 24.32 |
| Zm00001d050143_P001 | Maize | nucleus | 25.47 | 24.03 |
| Zm00001d015525_P001 | Maize | nucleus | 15.36 | 23.43 |
Protein Annotations
| EntrezGene:100262945 | wikigene:100262945 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:AM467922 | ProteinID:CAN74885 |
| ProteinID:CAN74885.1 | ProteinID:CCB59715 | ProteinID:CCB59715.1 | UniProt:F6HXT4 | EMBL:FN596494 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:IPR013087 | EntrezGene:LOC100262945 | wikigene:LOC100262945 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 |
| PANTHER:PTHR26374:SF258 | SUPFAM:SSF57667 | UniParc:UPI000198409C | ArrayExpress:VIT_09s0002g09080 | EnsemblPlantsGene:VIT_09s0002g09080 | EnsemblPlants:VIT_09s0002g09080.t01 |
| RefSeq:XP_002272545 | RefSeq:XP_002272545.1 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
No Description!
Coordinates
chr9:-:10638741..10639618
Molecular Weight (calculated)
29407.2 Da
IEP (calculated)
7.694
GRAVY (calculated)
-0.740
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIPRSEPCL SETSSIISVS EAAPSLNTSM DSPKEGKQQE GQDRNQEELT NPDLVLDLSL SSRDLEQGSR PELNLINSFE MGSSQNHSEI PQGNEGEPRV
101: FSCNYCQRKF YSSQALGGHQ NAHKRERTLA KRGQRIGAAS VAFGHPLPNP YRFSSMASLP LHGSFNRSLG IQAHSLIHKP SSLSSTLYGH QGWSRLPIDQ
201: QPAIGRLAPE NYHVGSSSSS GGAARFETVR KFSRPASEGI GGYWWNNSNN LKMNQDELQK LDLSLKL
101: FSCNYCQRKF YSSQALGGHQ NAHKRERTLA KRGQRIGAAS VAFGHPLPNP YRFSSMASLP LHGSFNRSLG IQAHSLIHKP SSLSSTLYGH QGWSRLPIDQ
201: QPAIGRLAPE NYHVGSSSSS GGAARFETVR KFSRPASEGI GGYWWNNSNN LKMNQDELQK LDLSLKL
001: MEPSIKGDQE MLKIKKQGHQ DLELGLTLLS RGTATSSELN LIDSFKTSSS STSHHQHQQE QLADPRVFSC NYCQRKFYSS QALGGHQNAH KRERTLAKRG
101: QYYKMTLSSL PSSAFAFGHG SVSRFASMAS LPLHGSVNNR STLGIQAHST IHKPSFLGRQ TTSLSHVFKQ SIHQKPTIGK MLPEKFHLEV AGNNNSNMVA
201: AKLERIGHFK SNQEDHNQFK KIDLTLKL
101: QYYKMTLSSL PSSAFAFGHG SVSRFASMAS LPLHGSVNNR STLGIQAHST IHKPSFLGRQ TTSLSHVFKQ SIHQKPTIGK MLPEKFHLEV AGNNNSNMVA
201: AKLERIGHFK SNQEDHNQFK KIDLTLKL
Arabidopsis Description
ZFP1At1g80730 [Source:UniProtKB/TrEMBL;Acc:Q0V814]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.