Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH17304 | Soybean | nucleus | 96.5 | 96.5 |
| KRG97966 | Soybean | nucleus | 74.71 | 76.49 |
| KRH30916 | Soybean | nucleus | 67.32 | 69.48 |
| Solyc11g011890.1.1 | Tomato | nucleus | 54.86 | 57.32 |
| PGSC0003DMT400034689 | Potato | nucleus | 54.86 | 57.09 |
| VIT_01s0011g06200.t01 | Wine grape | nucleus | 54.47 | 56.91 |
| Solyc04g014540.1.1 | Tomato | nucleus | 51.36 | 56.9 |
| PGSC0003DMT400060730 | Potato | nucleus | 51.36 | 55.93 |
| KRG89273 | Soybean | nucleus | 48.64 | 52.52 |
| KRH04587 | Soybean | cytosol | 39.69 | 51.52 |
| KRH58613 | Soybean | nucleus | 48.64 | 50.2 |
| KRH42519 | Soybean | nucleus | 48.25 | 49.4 |
| GSMUA_Achr6P11350_001 | Banana | nucleus | 41.63 | 48.2 |
| KRH49708 | Soybean | nucleus | 46.69 | 47.24 |
| Zm00001d047968_P001 | Maize | nucleus | 29.57 | 35.85 |
| Os03t0239300-01 | Rice | nucleus | 32.3 | 34.58 |
| EER92577 | Sorghum | cytosol, mitochondrion, nucleus | 29.96 | 33.62 |
| TraesCS4D01G230300.1 | Wheat | nucleus | 28.4 | 33.49 |
| Zm00001d028371_P001 | Maize | nucleus | 28.4 | 33.33 |
| HORVU4Hr1G064150.1 | Barley | plastid | 30.74 | 33.33 |
| KRH02887 | Soybean | nucleus | 21.01 | 33.33 |
| KRG91058 | Soybean | nucleus | 24.12 | 32.46 |
| KRH35714 | Soybean | nucleus | 23.74 | 32.45 |
| KRH19009 | Soybean | nucleus | 20.62 | 32.32 |
| TraesCS4A01G073200.1 | Wheat | nucleus | 30.35 | 32.23 |
| TraesCS4B01G229200.1 | Wheat | nucleus | 30.35 | 32.1 |
| KRH58019 | Soybean | nucleus | 24.51 | 31.66 |
| KRH57480 | Soybean | nucleus | 24.51 | 31.66 |
| KRH44531 | Soybean | nucleus | 26.85 | 30.67 |
| KRH04497 | Soybean | nucleus | 24.51 | 30.0 |
| KRH23633 | Soybean | nucleus | 26.46 | 29.82 |
| KRH47378 | Soybean | nucleus | 27.24 | 26.82 |
| KRH09666 | Soybean | nucleus | 27.24 | 26.32 |
| KRH61695 | Soybean | nucleus | 28.4 | 25.98 |
| KRH52363 | Soybean | nucleus | 27.63 | 24.23 |
| KRH15782 | Soybean | nucleus | 28.02 | 23.08 |
| KRH05270 | Soybean | nucleus | 28.4 | 22.26 |
| HORVU0Hr1G008920.1 | Barley | mitochondrion | 5.84 | 19.74 |
Protein Annotations
| EntrezGene:100788768 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02001257 | EnsemblPlantsGene:GLYMA_02G242400 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| UniProt:I1JHU2 | InterPro:IPR013087 | ProteinID:KRH72945.1 | ProteinID:KRH72946.1 | ProteinID:KRH72947.1 | ProteinID:KRH72948.1 |
| ProteinID:KRH72949.1 | ProteinID:KRH72950.1 | ProteinID:KRH72951.1 | EnsemblPlants:KRH72952 | ProteinID:KRH72952 | ProteinID:KRH72952.1 |
| ProteinID:KRH72953.1 | ProteinID:KRH72954.1 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF239 |
| SUPFAM:SSF57667 | UniParc:UPI0001876377 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr2:-:43088550..43094840
Molecular Weight (calculated)
28034.5 Da
IEP (calculated)
6.229
GRAVY (calculated)
-0.428
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPNFDLEVE ACAAYESEVS SQVASNVSIQ ETSIGPCSDS LTNISNITNP IGIHPNSDAI SLDLSLNFKN SAPGGRDSIG FSFSSTSESS NEPASQTTAA
101: TIPRVFSCNY CQRKFFSSQA LGGHQNAHKR ERTLAKRAMR MGFFSERYAN LASLPLHGSF RSLGIKAHSS LHHGFSPTMR RPEIKNNARF DQGYVGHPIF
201: LEDDESDLLW PGSFRQVAEA GDSHQNFILT GSSNLSFTEV NPPVDIDNST PDLTLKL
101: TIPRVFSCNY CQRKFFSSQA LGGHQNAHKR ERTLAKRAMR MGFFSERYAN LASLPLHGSF RSLGIKAHSS LHHGFSPTMR RPEIKNNARF DQGYVGHPIF
201: LEDDESDLLW PGSFRQVAEA GDSHQNFILT GSSNLSFTEV NPPVDIDNST PDLTLKL
001: MRPILDLEIE ASSGSSSSQV ASNLSPVGED YKPISLNLSL SFNNNNNNNL DLESSSLTLP LSSTSESSNP EQQQQQQPSV SKRVFSCNYC QRKFYSSQAL
101: GGHQNAHKRE RTLAKRAMRM GLAGVFPGRG SSSNYAAAAT AAALSCLPLH GSGNGNMTSF RTLGIRAHSS AHDVSMTRQT PETLIRNIAR FNQGYFGNCI
201: PFYVEDDEAE MLWPGSFRQA TNAVAVEAGN DNLGERKMDF LDVKQAMDME SSLPDLTLKL
101: GGHQNAHKRE RTLAKRAMRM GLAGVFPGRG SSSNYAAAAT AAALSCLPLH GSGNGNMTSF RTLGIRAHSS AHDVSMTRQT PETLIRNIAR FNQGYFGNCI
201: PFYVEDDEAE MLWPGSFRQA TNAVAVEAGN DNLGERKMDF LDVKQAMDME SSLPDLTLKL
Arabidopsis Description
ZFP4Zinc finger protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q39263]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.