Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g005130.2.1 | Tomato | nucleus | 96.4 | 96.4 |
| PGSC0003DMT400075890 | Potato | nucleus | 44.0 | 76.92 |
| PGSC0003DMT400075898 | Potato | nucleus | 70.4 | 74.89 |
| PGSC0003DMT400075895 | Potato | nucleus | 69.6 | 74.04 |
| KRH58613 | Soybean | nucleus | 56.8 | 57.03 |
| KRH42519 | Soybean | nucleus | 56.4 | 56.18 |
| KRG89273 | Soybean | nucleus | 49.6 | 52.1 |
| KRH04587 | Soybean | cytosol | 39.2 | 49.49 |
| PGSC0003DMT400034689 | Potato | nucleus | 48.0 | 48.58 |
| PGSC0003DMT400060730 | Potato | nucleus | 45.6 | 48.31 |
| KRH49708 | Soybean | nucleus | 48.4 | 47.64 |
| CDY07483 | Canola | nucleus | 42.0 | 42.68 |
| AT1G66140.1 | Thale cress | nucleus | 44.0 | 42.31 |
| GSMUA_Achr6P11350_001 | Banana | nucleus | 37.2 | 41.89 |
| Bra004148.1-P | Field mustard | nucleus | 42.4 | 41.73 |
| CDY39248 | Canola | cytosol | 26.0 | 40.12 |
| CDY65468 | Canola | nucleus | 42.0 | 40.08 |
| Bra039750.1-P | Field mustard | nucleus | 42.0 | 40.08 |
| CDY50321 | Canola | nucleus | 42.0 | 39.33 |
| PGSC0003DMT400066536 | Potato | nucleus | 25.6 | 36.99 |
| PGSC0003DMT400059824 | Potato | nucleus | 24.8 | 36.05 |
| Zm00001d047968_P001 | Maize | nucleus | 29.6 | 34.91 |
| PGSC0003DMT400048247 | Potato | nucleus, plastid | 21.6 | 34.84 |
| Zm00001d028371_P001 | Maize | nucleus | 29.6 | 33.79 |
| PGSC0003DMT400073330 | Potato | nucleus | 26.4 | 32.84 |
| EER92577 | Sorghum | cytosol, mitochondrion, nucleus | 30.0 | 32.75 |
| Os03t0239300-01 | Rice | nucleus | 31.2 | 32.5 |
| TraesCS4D01G230300.1 | Wheat | nucleus | 28.0 | 32.11 |
| HORVU4Hr1G064150.1 | Barley | plastid | 30.4 | 32.07 |
| TraesCS4A01G073200.1 | Wheat | nucleus | 30.4 | 31.41 |
| TraesCS4B01G229200.1 | Wheat | nucleus | 30.0 | 30.86 |
| PGSC0003DMT400036628 | Potato | nucleus | 26.0 | 29.28 |
| HORVU0Hr1G008920.1 | Barley | mitochondrion | 6.0 | 19.74 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400058615 | EnsemblPlantsGene:PGSC0003DMG400022772 | EntrezGene:102599457 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF313 |
| PFscan:PS50157 | PGSC:PGSC0003DMG400022772 | RefSeq:XP_006364059.1 | RefSeq:XP_015159248.1 | ScanProsite:PS00028 | SEG:seg |
| SUPFAM:SSF57667 | UniParc:UPI00029607DB | UniProt:M1C2Z5 | MapMan:15.5.15 | : | : |
Description
ZFP4 (ZINC FINGER PROTEIN 4) [Source:PGSC_GENE;Acc:PGSC0003DMG400022772]
Coordinates
chr1:+:375184..376999
Molecular Weight (calculated)
27526.2 Da
IEP (calculated)
6.794
GRAVY (calculated)
-0.651
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPPNFNLES EDESEVSSSQ VASNTSTQEV SPDPYKDSTT NSSCLTNSLN LQQESKLVTL DLTLGFNSGA DPESKGNPEA GSEVVPHPPA AQVSRIFSCN
101: FCRRKFYSSQ ALGGHQNAHK RERTLAKRAM RMGMLSERYA SLASLPLHGS PYRSLGIEAH ASMHQHASQQ QERHMHAIRG GARFEQGYFG VPVYMEDDDM
201: EMFWPGSFRQ VDGVGSNVVL NSGQRSNINF VPMAPPPKTQ PSLPDLNLKL
101: FCRRKFYSSQ ALGGHQNAHK RERTLAKRAM RMGMLSERYA SLASLPLHGS PYRSLGIEAH ASMHQHASQQ QERHMHAIRG GARFEQGYFG VPVYMEDDDM
201: EMFWPGSFRQ VDGVGSNVVL NSGQRSNINF VPMAPPPKTQ PSLPDLNLKL
001: MRPILDLEIE ASSGSSSSQV ASNLSPVGED YKPISLNLSL SFNNNNNNNL DLESSSLTLP LSSTSESSNP EQQQQQQPSV SKRVFSCNYC QRKFYSSQAL
101: GGHQNAHKRE RTLAKRAMRM GLAGVFPGRG SSSNYAAAAT AAALSCLPLH GSGNGNMTSF RTLGIRAHSS AHDVSMTRQT PETLIRNIAR FNQGYFGNCI
201: PFYVEDDEAE MLWPGSFRQA TNAVAVEAGN DNLGERKMDF LDVKQAMDME SSLPDLTLKL
101: GGHQNAHKRE RTLAKRAMRM GLAGVFPGRG SSSNYAAAAT AAALSCLPLH GSGNGNMTSF RTLGIRAHSS AHDVSMTRQT PETLIRNIAR FNQGYFGNCI
201: PFYVEDDEAE MLWPGSFRQA TNAVAVEAGN DNLGERKMDF LDVKQAMDME SSLPDLTLKL
Arabidopsis Description
ZFP4Zinc finger protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q39263]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.