Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g107430.2.1 | Tomato | nucleus | 95.95 | 95.95 |
| PGSC0003DMT400059824 | Potato | nucleus | 73.41 | 73.84 |
| VIT_03s0091g00260.t01 | Wine grape | nucleus | 60.12 | 55.03 |
| KRG91058 | Soybean | nucleus | 48.55 | 43.98 |
| KRH35714 | Soybean | nucleus | 46.24 | 42.55 |
| GSMUA_Achr10P... | Banana | nucleus | 42.77 | 40.66 |
| GSMUA_Achr4P03360_001 | Banana | nucleus | 41.04 | 39.44 |
| GSMUA_Achr6P24010_001 | Banana | nucleus | 38.15 | 37.93 |
| Zm00001d052006_P001 | Maize | nucleus | 25.43 | 37.61 |
| Zm00001d039773_P001 | Maize | nucleus | 25.43 | 37.61 |
| Zm00001d035262_P001 | Maize | nucleus | 25.43 | 37.61 |
| Zm00001d025350_P001 | Maize | nucleus | 25.43 | 37.61 |
| Zm00001d016069_P001 | Maize | nucleus | 25.43 | 37.61 |
| Zm00001d002745_P001 | Maize | nucleus | 25.43 | 37.61 |
| Zm00001d035257_P001 | Maize | nucleus | 24.86 | 36.75 |
| Zm00001d006367_P001 | Maize | nucleus | 24.86 | 36.75 |
| GSMUA_Achr4P10880_001 | Banana | nucleus | 38.15 | 35.29 |
| Zm00001d022022_P001 | Maize | nucleus | 35.84 | 34.83 |
| TraesCS5D01G084600.1 | Wheat | nucleus | 36.99 | 34.04 |
| TraesCS5B01G078100.1 | Wheat | nucleus | 36.99 | 34.04 |
| TraesCS5A01G071900.1 | Wheat | nucleus | 36.99 | 34.04 |
| EER97478 | Sorghum | nucleus | 34.68 | 33.71 |
| Os12t0581900-01 | Rice | nucleus | 37.57 | 33.33 |
| HORVU5Hr1G018830.1 | Barley | nucleus | 36.42 | 32.98 |
| Zm00001d030850_P001 | Maize | nucleus | 38.15 | 32.67 |
| Zm00001d006754_P001 | Maize | nucleus | 34.68 | 32.61 |
| TraesCS2A01G183800.1 | Wheat | nucleus | 32.95 | 32.57 |
| TraesCS2B01G210500.1 | Wheat | nucleus | 32.95 | 31.84 |
| HORVU2Hr1G034650.1 | Barley | nucleus | 32.95 | 31.84 |
| TraesCS2D01G191700.1 | Wheat | nucleus | 32.37 | 31.28 |
| Os07t0593000-01 | Rice | nucleus | 33.53 | 30.85 |
| PGSC0003DMT400075890 | Potato | nucleus | 24.86 | 30.07 |
| HORVU4Hr1G013330.1 | Barley | nucleus | 37.57 | 29.28 |
| TraesCS4D01G077000.1 | Wheat | nucleus | 38.15 | 29.2 |
| TraesCS4B01G078400.1 | Wheat | nucleus | 37.57 | 28.89 |
| Zm00001d041332_P001 | Maize | nucleus | 34.68 | 28.44 |
| Zm00001d013743_P001 | Maize | nucleus | 36.99 | 28.19 |
| PGSC0003DMT400075898 | Potato | nucleus | 38.15 | 28.09 |
| PGSC0003DMT400075895 | Potato | nucleus | 38.15 | 28.09 |
| PGSC0003DMT400048247 | Potato | nucleus, plastid | 24.86 | 27.74 |
| PGSC0003DMT400060730 | Potato | nucleus | 36.99 | 27.12 |
| Os03t0607700-01 | Rice | nucleus | 38.15 | 26.94 |
| PGSC0003DMT400058615 | Potato | nucleus | 36.99 | 25.6 |
| EER91243 | Sorghum | nucleus | 38.15 | 25.0 |
| Zm00001d033363_P001 | Maize | nucleus | 37.57 | 25.0 |
| PGSC0003DMT400073330 | Potato | nucleus | 28.9 | 24.88 |
| PGSC0003DMT400034689 | Potato | nucleus | 35.26 | 24.7 |
| PGSC0003DMT400036628 | Potato | nucleus | 28.9 | 22.52 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400066536 | EnsemblPlantsGene:PGSC0003DMG400025858 | EntrezGene:102597837 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF228 |
| PFscan:PS50157 | PGSC:PGSC0003DMG400025858 | RefSeq:XP_006346345.1 | ScanProsite:PS00028 | SUPFAM:SSF57667 | UniParc:UPI000296823E |
| UniProt:M1CFP8 | MapMan:15.5.15 | : | : | : | : |
Description
C2H2L domain class transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400025858]
Coordinates
chr1:-:83903356..83905669
Molecular Weight (calculated)
19443.0 Da
IEP (calculated)
10.524
GRAVY (calculated)
-0.780
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSAEDGSRG TSIFEQGEWL SLRLGRNSPS TSKESESQTR PTPGKVFSCN FCMRKFYSSQ ALGGHQNAHK RERGAVRQYQ SQRMMTMMAL PINNPMFRSL
101: GMVPHALVHR TGRDVSSTVA RFSEASTGFQ MTSHPNPVDE GFELKWPGSF RLNPQQSEDQ ASNTNKIDLN LKL
101: GMVPHALVHR TGRDVSSTVA RFSEASTGFQ MTSHPNPVDE GFELKWPGSF RLNPQQSEDQ ASNTNKIDLN LKL
001: MTESDDASRE TPASRGGEAS SNQDLSKPES NHVSLDLKLN DTFNDDTKST KCEANPRVFS CNYCRRKFYS SQALGGHQNA HKRERTMAKR AMHMGRMFGH
101: HHRPYTYTSS SLGMQAHSGL LHHTLSQPQP LVSRFHHQGY FGNTVPLFFD YDDGGSDFFW PGSFRQVVEE AEAPVVVVAS TESGLDLNSV AANGGVDNNS
201: SKPDLTLRL
101: HHRPYTYTSS SLGMQAHSGL LHHTLSQPQP LVSRFHHQGY FGNTVPLFFD YDDGGSDFFW PGSFRQVVEE AEAPVVVVAS TESGLDLNSV AANGGVDNNS
201: SKPDLTLRL
Arabidopsis Description
ZFP7Zinc finger protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q39266]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.