Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025350_P001 | Maize | nucleus | 64.61 | 98.29 |
| Zm00001d052006_P001 | Maize | nucleus | 64.04 | 97.44 |
| Zm00001d039773_P001 | Maize | nucleus | 64.04 | 97.44 |
| Zm00001d002745_P001 | Maize | nucleus | 64.04 | 97.44 |
| Zm00001d035262_P001 | Maize | nucleus | 63.48 | 96.58 |
| Zm00001d016069_P001 | Maize | nucleus | 63.48 | 96.58 |
| Zm00001d006367_P001 | Maize | nucleus | 63.48 | 96.58 |
| Zm00001d035257_P001 | Maize | nucleus | 62.92 | 95.73 |
| EER97478 | Sorghum | nucleus | 89.33 | 89.33 |
| Zm00001d006754_P001 | Maize | nucleus | 85.96 | 83.15 |
| TraesCS2A01G183800.1 | Wheat | nucleus | 65.73 | 66.86 |
| TraesCS2B01G210500.1 | Wheat | nucleus | 66.29 | 65.92 |
| TraesCS2D01G191700.1 | Wheat | nucleus | 65.73 | 65.36 |
| HORVU2Hr1G034650.1 | Barley | nucleus | 63.48 | 63.13 |
| Os07t0593000-01 | Rice | nucleus | 61.8 | 58.51 |
| GSMUA_Achr4P03360_001 | Banana | nucleus | 40.45 | 40.0 |
| GSMUA_Achr4P10880_001 | Banana | nucleus | 40.45 | 38.5 |
| VIT_03s0091g00260.t01 | Wine grape | nucleus | 39.89 | 37.57 |
| VIT_18s0001g09590.t01 | Wine grape | nucleus | 40.45 | 37.31 |
| Solyc01g107430.2.1 | Tomato | nucleus | 35.96 | 36.99 |
| PGSC0003DMT400066536 | Potato | nucleus | 34.83 | 35.84 |
| KRH35714 | Soybean | nucleus | 37.64 | 35.64 |
| KRG91058 | Soybean | nucleus | 37.64 | 35.08 |
| KRH58019 | Soybean | nucleus | 38.76 | 34.67 |
| PGSC0003DMT400059824 | Potato | nucleus | 33.15 | 34.3 |
| Solyc10g049870.1.1 | Tomato | nucleus | 32.58 | 33.72 |
| VIT_07s0129g00670.t01 | Wine grape | nucleus | 36.52 | 33.68 |
| Zm00001d041332_P001 | Maize | nucleus | 38.2 | 32.23 |
| Zm00001d030850_P001 | Maize | nucleus | 35.39 | 31.19 |
| KRH57480 | Soybean | nucleus | 34.27 | 30.65 |
| KRH04497 | Soybean | nucleus | 35.39 | 30.0 |
| Zm00001d013743_P001 | Maize | nucleus | 37.64 | 29.52 |
| Zm00001d033363_P001 | Maize | nucleus | 40.45 | 27.69 |
| Zm00001d028371_P001 | Maize | nucleus | 33.15 | 26.94 |
| Zm00001d031985_P001 | Maize | nucleus | 24.72 | 26.67 |
| Zm00001d047968_P001 | Maize | nucleus | 30.9 | 25.94 |
| Zm00001d021386_P001 | Maize | nucleus | 25.28 | 25.42 |
| Zm00001d015525_P001 | Maize | nucleus | 23.03 | 23.43 |
| Zm00001d050143_P001 | Maize | nucleus | 25.28 | 15.9 |
Protein Annotations
| EnsemblPlants:Zm00001d022022_P001 | EnsemblPlants:Zm00001d022022_T001 | EnsemblPlantsGene:Zm00001d022022 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF250 |
| PFscan:PS50157 | ProteinID:ONM59323.1 | ScanProsite:PS00028 | SUPFAM:SSF57667 | UniParc:UPI000220C678 | UniProt:A0A1D6IIL1 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
Zinc finger protein 7
Coordinates
chr7:+:168222635..168223171
Molecular Weight (calculated)
19672.5 Da
IEP (calculated)
9.286
GRAVY (calculated)
-0.556
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MERVPGVEEQ KSADQVNQAG LADESTTVPW LKLGLDAPKS EEVKPQEAKP VATPHRTFSC NYCMRKFFSS QALGGHQNAH KRERCAARRT YRLQMMMGLP
101: PSASFLQPLR VNSHSTILKG HGERAAVAVA RFDGGQMSGW MPFAVEEPGG LVWPGSFTAS SDESKKQMEK NLDLTLRL
101: PSASFLQPLR VNSHSTILKG HGERAAVAVA RFDGGQMSGW MPFAVEEPGG LVWPGSFTAS SDESKKQMEK NLDLTLRL
001: MRPILDLEIE ASSGSSSSQV ASNLSPVGED YKPISLNLSL SFNNNNNNNL DLESSSLTLP LSSTSESSNP EQQQQQQPSV SKRVFSCNYC QRKFYSSQAL
101: GGHQNAHKRE RTLAKRAMRM GLAGVFPGRG SSSNYAAAAT AAALSCLPLH GSGNGNMTSF RTLGIRAHSS AHDVSMTRQT PETLIRNIAR FNQGYFGNCI
201: PFYVEDDEAE MLWPGSFRQA TNAVAVEAGN DNLGERKMDF LDVKQAMDME SSLPDLTLKL
101: GGHQNAHKRE RTLAKRAMRM GLAGVFPGRG SSSNYAAAAT AAALSCLPLH GSGNGNMTSF RTLGIRAHSS AHDVSMTRQT PETLIRNIAR FNQGYFGNCI
201: PFYVEDDEAE MLWPGSFRQA TNAVAVEAGN DNLGERKMDF LDVKQAMDME SSLPDLTLKL
Arabidopsis Description
ZFP4Zinc finger protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q39263]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.