Factsheet for Zm00001d025350_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052006_P001	Maize	nucleus	99.15	99.15
Zm00001d039773_P001	Maize	nucleus	99.15	99.15
Zm00001d002745_P001	Maize	nucleus	99.15	99.15
Zm00001d035262_P001	Maize	nucleus	98.29	98.29
Zm00001d016069_P001	Maize	nucleus	98.29	98.29
Zm00001d006367_P001	Maize	nucleus	98.29	98.29
Zm00001d035257_P001	Maize	nucleus	97.44	97.44
Zm00001d022022_P001	Maize	nucleus	98.29	64.61
EER97478	Sorghum	nucleus	91.45	60.11
Zm00001d006754_P001	Maize	nucleus	88.03	55.98
TraesCS2A01G183800.1	Wheat	nucleus	66.67	44.57
TraesCS2B01G210500.1	Wheat	nucleus	66.67	43.58
TraesCS2D01G191700.1	Wheat	nucleus	65.81	43.02
HORVU2Hr1G034650.1	Barley	nucleus	63.25	41.34
Os07t0593000-01	Rice	nucleus	62.39	38.83
GSMUA_Achr4P03360_001	Banana	nucleus	41.03	26.67
GSMUA_Achr4P10880_001	Banana	nucleus	41.88	26.2
Solyc01g107430.2.1	Tomato	nucleus	38.46	26.01
PGSC0003DMT400059824	Potato	nucleus	37.61	25.58
PGSC0003DMT400066536	Potato	nucleus	37.61	25.43
VIT_18s0001g09590.t01	Wine grape	nucleus	41.88	25.39
Solyc10g049870.1.1	Tomato	nucleus	36.75	25.0
KRH35714	Soybean	nucleus	39.32	24.47
VIT_03s0091g00260.t01	Wine grape	nucleus	38.46	23.81
KRG91058	Soybean	nucleus	38.46	23.56
KRH58019	Soybean	nucleus	39.32	23.12
VIT_07s0129g00670.t01	Wine grape	nucleus	36.75	22.28
Zm00001d030850_P001	Maize	nucleus	38.46	22.28
Zm00001d041332_P001	Maize	nucleus	40.17	22.27
Zm00001d028371_P001	Maize	nucleus	41.03	21.92
Zm00001d031985_P001	Maize	nucleus	30.77	21.82
Zm00001d013743_P001	Maize	nucleus	41.03	21.15
KRH57480	Soybean	nucleus	35.9	21.11
KRH04497	Soybean	nucleus	36.75	20.48
Zm00001d021386_P001	Maize	nucleus	30.77	20.34
Zm00001d047968_P001	Maize	nucleus	35.9	19.81
Zm00001d033363_P001	Maize	nucleus	43.59	19.62
Zm00001d015525_P001	Maize	nucleus	26.5	17.71
Zm00001d050143_P001	Maize	nucleus	31.62	13.07

Protein Annotations

EnsemblPlants:Zm00001d025350_P001	EnsemblPlants:Zm00001d025350_T001	EnsemblPlantsGene:Zm00001d025350	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374	PANTHER:PTHR26374:SF250	PFscan:PS50157
ProteinID:AQK43570.1	ScanProsite:PS00028	SUPFAM:SSF57667	UniParc:UPI0008433939	UniProt:A0A1D6J6M3	MapMan:35.2

Description

Zinc finger protein 1

Coordinates

chr10:-:115137909..115138444

Molecular Weight (calculated)

12926.2 Da

IEP (calculated)

6.785

GRAVY (calculated)

-0.728

Length

117 amino acids

Sequence
(BLAST)

001: MERVPGVEEQ KSADQVNQAG LADESTTVPW LKLGLDAPKS EEVKPQEVKP VATPHRTFSC NYCMRKFFSS QALGGHQNAH KRGVEEPGGL VWPGSFTASS
101: DESKKQMEKN LDLTLRL

Best Arabidopsis Sequence Match ( AT1G80730.1 )
(BLAST)

001: MEPSIKGDQE MLKIKKQGHQ DLELGLTLLS RGTATSSELN LIDSFKTSSS STSHHQHQQE QLADPRVFSC NYCQRKFYSS QALGGHQNAH KRERTLAKRG
101: QYYKMTLSSL PSSAFAFGHG SVSRFASMAS LPLHGSVNNR STLGIQAHST IHKPSFLGRQ TTSLSHVFKQ SIHQKPTIGK MLPEKFHLEV AGNNNSNMVA
201: AKLERIGHFK SNQEDHNQFK KIDLTLKL

Arabidopsis Description

ZFP1At1g80730 [Source:UniProtKB/TrEMBL;Acc:Q0V814]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.