Factsheet for Zm00001d031985_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80725	Sorghum	nucleus	83.03	82.53
TraesCS7A01G276700.1	Wheat	nucleus	58.18	64.43
TraesCS7D01G276700.1	Wheat	nucleus	59.39	64.05
TraesCS7B01G174400.1	Wheat	nucleus	59.39	64.05
Os08t0555700-00	Rice	cytosol, nucleus, plastid	55.76	58.23
HORVU7Hr1G058220.1	Barley	plastid	56.36	47.21
Bra006815.1-P	Field mustard	nucleus, plastid	30.3	33.33
Bra020437.1-P	Field mustard	nucleus, plastid	30.3	33.33
CDY11864	Canola	nucleus, plastid	30.3	33.33
CDY58140	Canola	nucleus, plastid	30.3	33.33
CDY60000	Canola	nucleus, plastid	30.3	33.33
AT5G57520.1	Thale cress	nucleus, plastid	30.3	33.33
PGSC0003DMT400048247	Potato	nucleus, plastid	30.3	32.26
Solyc07g006880.1.1	Tomato	nucleus, plastid	31.52	31.9
VIT_11s0052g01120.t01	Wine grape	nucleus	29.7	31.82
Zm00001d021386_P001	Maize	nucleus	33.94	31.64
Zm00001d025350_P001	Maize	nucleus	21.82	30.77
KRH19009	Soybean	nucleus	30.3	30.49
Zm00001d052006_P001	Maize	nucleus	21.21	29.91
Zm00001d039773_P001	Maize	nucleus	21.21	29.91
Zm00001d035262_P001	Maize	nucleus	21.21	29.91
Zm00001d035257_P001	Maize	nucleus	21.21	29.91
Zm00001d016069_P001	Maize	nucleus	21.21	29.91
Zm00001d002745_P001	Maize	nucleus	21.21	29.91
Zm00001d006367_P001	Maize	nucleus	20.61	29.06
KRH02887	Soybean	nucleus	28.48	29.01
Zm00001d022022_P001	Maize	nucleus	26.67	24.72
Zm00001d006754_P001	Maize	nucleus	27.27	24.46
Zm00001d013743_P001	Maize	nucleus	31.52	22.91
Zm00001d030850_P001	Maize	nucleus	27.88	22.77
Zm00001d041332_P001	Maize	nucleus	28.48	22.27
Zm00001d047968_P001	Maize	nucleus	27.88	21.7
Zm00001d015525_P001	Maize	nucleus	22.42	21.14
Zm00001d028371_P001	Maize	nucleus	27.88	21.0
Zm00001d033363_P001	Maize	nucleus	32.73	20.77
Zm00001d050143_P001	Maize	nucleus	27.88	16.25

Protein Annotations

EnsemblPlants:Zm00001d031985_P001	EnsemblPlants:Zm00001d031985_T001	EnsemblPlantsGene:Zm00001d031985	EntrezGene:103643204	Gene3D:3.30.160.60	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR26374
PANTHER:PTHR26374:SF311	PFscan:PS50157	ProteinID:ONM04155.1	ScanProsite:PS00028	SEG:seg	SUPFAM:SSF57667
UniParc:UPI00017069B3	UniProt:A0A1D6KMU8	MapMan:15.5.15	:	:	:

Description

Zinc finger protein 2

Coordinates

chr1:+:208668619..208669116

Molecular Weight (calculated)

17237.0 Da

IEP (calculated)

8.505

GRAVY (calculated)

-0.273

Length

165 amino acids

Sequence
(BLAST)

001: MARQPAGGDD VNLDLRLVHH QSASGGMGRL QHHHLPPVAA DDPDRSFSCT YCRRKFFSSQ ALGGHQNAHK LERSLAKRSR ELSSAVAVVS AAISSSSAAA
101: AAAPRAAASE LCSWYPTAQA GGPGDQAAAA AVVSWIADGG RRYAYRVQQA AAASDADDID LSLRL

Best Arabidopsis Sequence Match ( AT5G57520.1 )
(BLAST)

001: MDYQPNTSLR LSLPSYKNHQ LNLELVLEPS SMSSSSSSST NSSSCLEQPR VFSCNYCQRK FYSSQALGGH QNAHKLERTL AKKSRELFRS SNTVDSDQPY
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL

Arabidopsis Description

ZFP2Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.