Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99346 | Sorghum | nucleus | 75.14 | 78.7 |
| TraesCS5D01G369800.1 | Wheat | nucleus | 45.2 | 50.63 |
| HORVU5Hr1G088880.1 | Barley | nucleus | 41.81 | 50.0 |
| TraesCS5B01G363400.1 | Wheat | nucleus | 42.37 | 49.34 |
| TraesCS5D01G369900.1 | Wheat | nucleus | 46.33 | 48.52 |
| TraesCS5A01G360700.1 | Wheat | nucleus | 43.5 | 48.43 |
| TraesCS5B01G363300.1 | Wheat | nucleus | 46.33 | 47.95 |
| TraesCS5B01G363600.1 | Wheat | nucleus | 40.11 | 47.65 |
| TraesCS5A01G360600.1 | Wheat | nucleus | 45.2 | 46.51 |
| HORVU0Hr1G031830.1 | Barley | nucleus | 37.29 | 44.59 |
| TraesCS5A01G361000.1 | Wheat | nucleus | 39.55 | 44.03 |
| HORVU5Hr1G088860.1 | Barley | nucleus | 46.33 | 40.8 |
| HORVU5Hr1G088950.1 | Barley | nucleus | 37.85 | 38.95 |
| TraesCS5B01G363200.1 | Wheat | mitochondrion | 44.07 | 37.5 |
| Zm00001d031985_P001 | Maize | nucleus | 31.64 | 33.94 |
| PGSC0003DMT400048247 | Potato | nucleus, plastid | 28.25 | 32.26 |
| Bra006815.1-P | Field mustard | nucleus, plastid | 26.55 | 31.33 |
| CDY11864 | Canola | nucleus, plastid | 26.55 | 31.33 |
| Zm00001d025350_P001 | Maize | nucleus | 20.34 | 30.77 |
| AT5G57520.1 | Thale cress | nucleus, plastid | 25.99 | 30.67 |
| VIT_11s0052g01120.t01 | Wine grape | nucleus | 26.55 | 30.52 |
| Solyc07g006880.1.1 | Tomato | nucleus, plastid | 27.68 | 30.06 |
| CDY60000 | Canola | nucleus, plastid | 25.42 | 30.0 |
| CDY58140 | Canola | nucleus, plastid | 25.42 | 30.0 |
| Bra020437.1-P | Field mustard | nucleus, plastid | 25.42 | 30.0 |
| Zm00001d016069_P001 | Maize | nucleus | 19.77 | 29.91 |
| Zm00001d052006_P001 | Maize | nucleus | 19.77 | 29.91 |
| Zm00001d039773_P001 | Maize | nucleus | 19.77 | 29.91 |
| Zm00001d035262_P001 | Maize | nucleus | 19.77 | 29.91 |
| Zm00001d035257_P001 | Maize | nucleus | 19.77 | 29.91 |
| Zm00001d002745_P001 | Maize | nucleus | 19.77 | 29.91 |
| KRH19009 | Soybean | nucleus | 27.68 | 29.88 |
| Zm00001d006367_P001 | Maize | nucleus | 19.21 | 29.06 |
| KRH02887 | Soybean | nucleus | 25.99 | 28.4 |
| Zm00001d022022_P001 | Maize | nucleus | 25.42 | 25.28 |
| Zm00001d006754_P001 | Maize | nucleus | 24.86 | 23.91 |
| Zm00001d041332_P001 | Maize | nucleus | 28.25 | 23.7 |
| Zm00001d047968_P001 | Maize | nucleus | 28.25 | 23.58 |
| Zm00001d013743_P001 | Maize | nucleus | 29.94 | 23.35 |
| Zm00001d028371_P001 | Maize | nucleus | 28.25 | 22.83 |
| Zm00001d030850_P001 | Maize | nucleus | 25.99 | 22.77 |
| Zm00001d015525_P001 | Maize | nucleus | 20.9 | 21.14 |
| Zm00001d033363_P001 | Maize | nucleus | 28.81 | 19.62 |
| Zm00001d050143_P001 | Maize | nucleus | 25.99 | 16.25 |
Protein Annotations
| EMBL:EU960522 | EnsemblPlants:Zm00001d021386_P001 | EnsemblPlants:Zm00001d021386_T001 | EnsemblPlantsGene:Zm00001d021386 | EntrezGene:100282331 | Gene3D:3.30.160.60 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 |
| PANTHER:PTHR26374:SF311 | PFscan:PS50157 | ProteinID:ONM57012.1 | ScanProsite:PS00028 | SEG:seg | UniParc:UPI000182C744 |
| UniProt:B6T6A7 | MapMan:15.5.15 | : | : | : | : |
Description
Zinc finger protein 2
Coordinates
chr7:+:150642387..150642920
Molecular Weight (calculated)
18360.5 Da
IEP (calculated)
7.671
GRAVY (calculated)
-0.398
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MENAPTSHAH GVSLDLRLDP SPLHRSAAVP VPAPPFAADH RPGEAFACNY CHRKFCSSQA LGGHQNAHKL ERTLAKRSRD ILAAPPPSSP PPPAPAVAFH
101: AAAPESNRRS GLVPTAYYGA TRLAREEDAM AQQAAPPGFA MGWGADTAAA ADGGCGRLGL GHGHGQSGEE IDLSLKL
101: AAAPESNRRS GLVPTAYYGA TRLAREEDAM AQQAAPPGFA MGWGADTAAA ADGGCGRLGL GHGHGQSGEE IDLSLKL
001: MDYQPNTSLR LSLPSYKNHQ LNLELVLEPS SMSSSSSSST NSSSCLEQPR VFSCNYCQRK FYSSQALGGH QNAHKLERTL AKKSRELFRS SNTVDSDQPY
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL
Arabidopsis Description
ZFP2Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.