Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G369800.1 | Wheat | nucleus | 65.87 | 86.71 |
| TraesCS5B01G363300.1 | Wheat | nucleus | 60.1 | 73.1 |
| TraesCS5B01G363400.1 | Wheat | nucleus | 50.48 | 69.08 |
| HORVU5Hr1G088860.1 | Barley | nucleus | 66.35 | 68.66 |
| TraesCS5B01G363600.1 | Wheat | nucleus | 42.79 | 59.73 |
| Zm00001d021386_P001 | Maize | nucleus | 37.5 | 44.07 |
| EER99346 | Sorghum | nucleus | 34.62 | 42.6 |
| TraesCS7B01G174400.1 | Wheat | nucleus | 27.88 | 37.91 |
| VIT_11s0052g01120.t01 | Wine grape | nucleus | 23.08 | 31.17 |
| PGSC0003DMT400048247 | Potato | nucleus, plastid | 23.08 | 30.97 |
| Solyc07g006880.1.1 | Tomato | nucleus, plastid | 23.56 | 30.06 |
| KRH19009 | Soybean | nucleus | 23.56 | 29.88 |
| CDY60000 | Canola | nucleus, plastid | 20.67 | 28.67 |
| CDY58140 | Canola | nucleus, plastid | 20.67 | 28.67 |
| Bra020437.1-P | Field mustard | nucleus, plastid | 20.67 | 28.67 |
| AT5G57520.1 | Thale cress | nucleus, plastid | 20.67 | 28.67 |
| KRH02887 | Soybean | nucleus | 22.12 | 28.4 |
| Bra006815.1-P | Field mustard | nucleus, plastid | 20.19 | 28.0 |
| CDY11864 | Canola | nucleus, plastid | 20.19 | 28.0 |
| TraesCS5B01G078100.1 | Wheat | nucleus | 22.12 | 24.47 |
| TraesCS2B01G210500.1 | Wheat | nucleus | 20.19 | 23.46 |
| TraesCS4B01G078400.1 | Wheat | nucleus | 21.63 | 20.0 |
| TraesCS3B01G560300.1 | Wheat | nucleus | 23.08 | 18.9 |
| TraesCS4B01G229200.1 | Wheat | nucleus | 21.63 | 18.52 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G363200.1 | EnsemblPlantsGene:TraesCS5B01G363200 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR26374 | PANTHER:PTHR26374:SF311 | PFscan:PS50157 |
| ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 | MapMan:15.5.15 | : | : |
Description
No Description!
Coordinates
chr5B:-:542295274..542295900
Molecular Weight (calculated)
22206.5 Da
IEP (calculated)
10.009
GRAVY (calculated)
-0.235
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MHAYAALYRA VPVHRPHFSC LYTTGERDRD RLLKPPPRAT ASSFLIHTHA ALLALRPSTM EREAEARRQL LLHSVSLDLR LGTATHKHGG ARAASPATPA
101: ALDNAGREAF ACNYCHRKFL SSQALGGHQN AHKLERTLAK RSRDVPSSST AAHSWLHAGG GELWGYSALA AAPDSATMAP LMGMGMGWAG TAAAAGEAVP
201: EMDLSLKL
101: ALDNAGREAF ACNYCHRKFL SSQALGGHQN AHKLERTLAK RSRDVPSSST AAHSWLHAGG GELWGYSALA AAPDSATMAP LMGMGMGWAG TAAAAGEAVP
201: EMDLSLKL
001: MDYQPNTSLR LSLPSYKNHQ LNLELVLEPS SMSSSSSSST NSSSCLEQPR VFSCNYCQRK FYSSQALGGH QNAHKLERTL AKKSRELFRS SNTVDSDQPY
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL
101: PFSGRFELYG RGYQGFLESG GSRDFSARRV PESGLDQDQE KSHLDLSLRL
Arabidopsis Description
ZFP2Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.