Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g112650.2.1 | Tomato | plastid | 92.38 | 92.79 |
| GSMUA_Achr7P14630_001 | Banana | vacuole | 68.16 | 70.05 |
| Os01t0235300-01 | Rice | extracellular | 60.54 | 63.08 |
| KRH03257 | Soybean | endoplasmic reticulum, extracellular | 60.09 | 62.91 |
| TraesCS3A01G158300.1 | Wheat | extracellular, plasma membrane | 60.54 | 62.79 |
| TraesCS3D01G166000.1 | Wheat | extracellular, plasma membrane | 60.54 | 62.79 |
| HORVU3Hr1G057370.2 | Barley | endoplasmic reticulum, plasma membrane | 60.54 | 62.5 |
| VIT_17s0000g08830.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 69.51 | 62.5 |
| EES02177 | Sorghum | endoplasmic reticulum, extracellular | 59.64 | 60.73 |
| Zm00001d039273_P001 | Maize | extracellular | 56.95 | 55.95 |
| HORVU3Hr1G057380.2 | Barley | mitochondrion, plastid | 60.54 | 55.79 |
| PGSC0003DMT400071037 | Potato | extracellular | 32.29 | 32.58 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400046783 | EnsemblPlantsGene:PGSC0003DMG400018165 | EntrezGene:102597711 | Gene3D:3.20.80.10 | InterPro:IPR011256 | InterPro:Reg_factor_effector_dom_sf |
| InterPro:SOUL_haem-bd | PANTHER:PTHR11220 | PANTHER:PTHR11220:SF36 | PFAM:PF04832 | PFscan:PS51257 | PGSC:PGSC0003DMG400018165 |
| RefSeq:XP_006344430.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF55136 | UniParc:UPI000295FA4E | UniProt:M1BJL9 |
| MapMan:35.2 | : | : | : | : | : |
Description
Heme-binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400018165]
Coordinates
chr3:+:52444054..52446874
Molecular Weight (calculated)
24955.9 Da
IEP (calculated)
9.100
GRAVY (calculated)
-0.093
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKSSLKNAL MVILLVITIA CSTKLCKAIE SPQYKIVHSE SDFEIRHYRE SVWMAAPVNE ISFEKATRNG FHRLFQFIQG ANLNFSRIYM TKPVLTSIVP
101: GAGPLHSSAY FVKFYLPDKF QADPPLPLPE LNLQPDPWTS HCIAVRKFSG FARDSNIVKE AEKLALSLSR SPWANTTAST SEYAYSIAQY NSPFRIIGRV
201: NEVWVDVTGS RANGCESNPI AAY
101: GAGPLHSSAY FVKFYLPDKF QADPPLPLPE LNLQPDPWTS HCIAVRKFSG FARDSNIVKE AEKLALSLSR SPWANTTAST SEYAYSIAQY NSPFRIIGRV
201: NEVWVDVTGS RANGCESNPI AAY
001: MATGLGFFKL SFLLSLLSGG SDLLGPDAES GVAQIGKFPP SCNRIECPSY ELVHSGNGYE IRRYNNTVWV STEPIPDISL VDATRTAFFQ LFAYIQGKNE
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
Arabidopsis Description
HBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6J0]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.