Factsheet for Zm00001d039273_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

extracellular: 20408568
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02177	Sorghum	endoplasmic reticulum, extracellular	84.14	87.21
Os01t0235300-01	Rice	extracellular	74.01	78.5
TraesCS3D01G166000.1	Wheat	extracellular, plasma membrane	73.13	77.21
HORVU3Hr1G057370.2	Barley	endoplasmic reticulum, plasma membrane	73.13	76.85
TraesCS3A01G158300.1	Wheat	extracellular, plasma membrane	72.25	76.28
HORVU3Hr1G057380.2	Barley	mitochondrion, plastid	73.13	68.59
GSMUA_Achr7P14630_001	Banana	vacuole	60.79	63.59
PGSC0003DMT400046783	Potato	extracellular	55.95	56.95
Solyc03g112650.2.1	Tomato	plastid	55.07	56.31
KRH03257	Soybean	endoplasmic reticulum, extracellular	51.54	54.93
VIT_17s0000g08830.t01	Wine grape	cytosol, peroxisome, plasma membrane	55.95	51.21
VIT_01s0127g00050.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	37.0	39.62
Zm00001d039387_P001	Maize	extracellular	36.56	38.07
KRG99406	Soybean	extracellular	34.8	30.15

Protein Annotations

EMBL:BT040182	EnsemblPlants:Zm00001d039273_P001	EnsemblPlants:Zm00001d039273_T001	EnsemblPlantsGene:Zm00001d039273	EntrezGene:100273098	Gene3D:3.20.80.10
InterPro:IPR011256	InterPro:Reg_factor_effector_dom_sf	InterPro:SOUL_haem-bd	PANTHER:PTHR11220	PANTHER:PTHR11220:SF36	PFAM:PF04832
ProteinID:ONM28179.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF55136	UniParc:UPI00017B7ABF	UniProt:B4FSU4
MapMan:35.2	:	:	:	:	:

Description

SOUL heme-binding family protein

Coordinates

chr3:-:900767..901685

Molecular Weight (calculated)

24879.8 Da

IEP (calculated)

9.540

GRAVY (calculated)

-0.106

Length

227 amino acids

Sequence
(BLAST)

001: MAKQQNPIPI PMPLSLSLPL VLVALLLPAA RGAAETPQYT TVHAESDFEV RLYGDTVWMS APTPDIPSFH VATKLGFHRL FQYLMGANLN SSRIRMTTPV
101: LTSVVPGAGP LRSSAYSVRL YLPAKFQASP PVPLPELNLH PDRWPGHCVA ARSFSGRARD KNVVEEAEKL AMSLSRSPWA NSTDYSSKSA YSVAQYSSPF
201: RIIGRVNEVW FDVNCRSTST AAGVESY

Best Arabidopsis Sequence Match ( AT1G17100.1 )
(BLAST)

001: MATGLGFFKL SFLLSLLSGG SDLLGPDAES GVAQIGKFPP SCNRIECPSY ELVHSGNGYE IRRYNNTVWV STEPIPDISL VDATRTAFFQ LFAYIQGKNE
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV

Arabidopsis Description

HBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6J0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.