Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 5
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
22908117
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400046783 | Potato | extracellular | 92.79 | 92.38 |
GSMUA_Achr7P14630_001 | Banana | vacuole | 68.02 | 69.59 |
KRH03257 | Soybean | endoplasmic reticulum, extracellular | 60.81 | 63.38 |
TraesCS3A01G158300.1 | Wheat | extracellular, plasma membrane | 60.36 | 62.33 |
Os01t0235300-01 | Rice | extracellular | 59.91 | 62.15 |
HORVU3Hr1G057370.2 | Barley | endoplasmic reticulum, plasma membrane | 60.36 | 62.04 |
TraesCS3D01G166000.1 | Wheat | extracellular, plasma membrane | 59.91 | 61.86 |
VIT_17s0000g08830.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 68.47 | 61.29 |
EES02177 | Sorghum | endoplasmic reticulum, extracellular | 59.46 | 60.27 |
HORVU3Hr1G057380.2 | Barley | mitochondrion, plastid | 60.36 | 55.37 |
Zm00001d039273_P001 | Maize | extracellular | 56.31 | 55.07 |
Solyc07g061800.2.1 | Tomato | extracellular | 33.78 | 33.78 |
Solyc07g061790.2.1 | Tomato | extracellular | 31.98 | 31.0 |
Protein Annotations
EnsemblPlants:Solyc03g112650.2.1 | EnsemblPlantsGene:Solyc03g112650.2 | Gene3D:3.20.80.10 | InterPro:IPR011256 | InterPro:Reg_factor_effector_dom_sf | InterPro:SOUL_haem-bd |
PANTHER:PTHR11220 | PANTHER:PTHR11220:SF36 | PFAM:PF04832 | PFscan:PS51257 | SEG:seg | SignalP:SignalP-noTM |
SUPFAM:SSF55136 | UniParc:UPI000276768F | UniProt:K4BKB8 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr3:+:63023048..63025730
Molecular Weight (calculated)
24975.7 Da
IEP (calculated)
8.445
GRAVY (calculated)
-0.164
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKSRLKNGL IIVFAITIAC SAEFSKAIES PEYRIVHSES DFEIRHYRES VWMVAPVNEI SFEKATRNGF HRLFQFIQGA NLNFSRIYMT KPVLTSIVPG
101: AGPLHSSAYF VKFYLPDKFQ ADPPLPLPEL NLQPDPWTSH CIAVRKFSGF ARDSNIVKEA EKLALSLSRS PWANSTASTS EYAYSIAQYN SPFRIIGRVN
201: EVWVDVTGSR ANGCESNPIA AY
101: AGPLHSSAYF VKFYLPDKFQ ADPPLPLPEL NLQPDPWTSH CIAVRKFSGF ARDSNIVKEA EKLALSLSRS PWANSTASTS EYAYSIAQYN SPFRIIGRVN
201: EVWVDVTGSR ANGCESNPIA AY
001: MATGLGFFKL SFLLSLLSGG SDLLGPDAES GVAQIGKFPP SCNRIECPSY ELVHSGNGYE IRRYNNTVWV STEPIPDISL VDATRTAFFQ LFAYIQGKNE
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
Arabidopsis Description
HBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6J0]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.