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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 2
  • peroxisome 1
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400046783 Potato extracellular 62.5 69.51
Solyc03g112650.2.1 Tomato plastid 61.29 68.47
GSMUA_Achr7P14630_001 Banana vacuole 58.47 66.82
EES02177 Sorghum endoplasmic reticulum, extracellular 53.63 60.73
Os01t0235300-01 Rice extracellular 51.61 59.81
TraesCS3A01G158300.1 Wheat extracellular, plasma membrane 51.21 59.07
TraesCS3D01G166000.1 Wheat extracellular, plasma membrane 51.21 59.07
HORVU3Hr1G057370.2 Barley endoplasmic reticulum, plasma membrane 51.21 58.8
KRH03257 Soybean endoplasmic reticulum, extracellular 49.6 57.75
Zm00001d039273_P001 Maize extracellular 51.21 55.95
HORVU3Hr1G057380.2 Barley mitochondrion, plastid 51.21 52.48
VIT_01s0127g00050.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 37.5 43.87
VIT_01s0150g00060.t01 Wine grape cytosol 22.18 34.59
VIT_19s0140g00210.t01 Wine grape endoplasmic reticulum, vacuole 31.45 34.36
Protein Annotations
ArrayExpress:VIT_17s0000g08830EMBL:FN594950EnsemblPlants:VIT_17s0000g08830.t01EnsemblPlantsGene:VIT_17s0000g08830Gene3D:3.20.80.10InterPro:IPR011256
InterPro:Reg_factor_effector_dom_sfInterPro:SOUL_haem-bdPANTHER:PTHR11220PANTHER:PTHR11220:SF36PFAM:PF04832ProteinID:CBI14992
ProteinID:CBI14992.3SEG:segSUPFAM:SSF55136UniParc:UPI0001BE0C67UniProt:D7SHN2MapMan:35.2
Description
No Description!
Coordinates
chr17:-:10241732..10248968
Molecular Weight (calculated)
27866.4 Da
IEP (calculated)
6.773
GRAVY (calculated)
0.015
Length
248 amino acids
Sequence
(BLAST)
001: MTHVSDIKLI RTDTTLDLSQ KAEKGMLSTA TMFLFYIEFL GCPILCCLAL CKGIESPEFA VIHAESDFEV RLYPESTWMT ASVRDISFEK STWNGFHRLF
101: QYIQGANLNF SRIAMTAPVL TSIVPGAGPL HSSAYFVRFY LPVKFQATPP LPLPELHLKP DKWAIHCIAV RKFSGYARDD NIVKEAEKLA ISLSRSPWAN
201: FTTSESNYAY SIAQYSSPFQ IFGRVNEIWV DVKNSGLEGC ESSSVSTY
Best Arabidopsis Sequence Match ( AT1G17100.1 )
(BLAST)
001: MATGLGFFKL SFLLSLLSGG SDLLGPDAES GVAQIGKFPP SCNRIECPSY ELVHSGNGYE IRRYNNTVWV STEPIPDISL VDATRTAFFQ LFAYIQGKNE
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
Arabidopsis Description
HBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6J0]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.