Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P14630_001 | Banana | vacuole | 48.58 | 47.47 |
| TraesCS3A01G158300.1 | Wheat | extracellular, plasma membrane | 40.57 | 40.0 |
| TraesCS3D01G166000.1 | Wheat | extracellular, plasma membrane | 40.09 | 39.53 |
| HORVU3Hr1G057370.2 | Barley | endoplasmic reticulum, plasma membrane | 40.09 | 39.35 |
| Os01t0235300-01 | Rice | extracellular | 39.15 | 38.78 |
| EES02177 | Sorghum | endoplasmic reticulum, extracellular | 39.62 | 38.36 |
| KRG99406 | Soybean | extracellular | 47.17 | 38.17 |
| VIT_17s0000g08830.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 43.87 | 37.5 |
| Zm00001d039273_P001 | Maize | extracellular | 39.62 | 37.0 |
| HORVU3Hr1G057380.2 | Barley | mitochondrion, plastid | 40.09 | 35.12 |
| VIT_19s0140g00210.t01 | Wine grape | endoplasmic reticulum, vacuole | 29.72 | 27.75 |
| VIT_01s0150g00060.t01 | Wine grape | cytosol | 20.28 | 27.04 |
Protein Annotations
| EntrezGene:100250014 | wikigene:100250014 | Gene3D:3.20.80.10 | MapMan:35.2 | ProteinID:CBI28586 | ProteinID:CBI28586.3 |
| UniProt:D7TDL3 | EMBL:FN595761 | InterPro:IPR011256 | EntrezGene:LOC100250014 | wikigene:LOC100250014 | PFAM:PF04832 |
| PANTHER:PTHR11220 | PANTHER:PTHR11220:SF36 | InterPro:Reg_factor_effector_dom_sf | InterPro:SOUL_haem-bd | SUPFAM:SSF55136 | SignalP:SignalP-noTM |
| UniParc:UPI00015CCDDC | ArrayExpress:VIT_01s0127g00050 | EnsemblPlantsGene:VIT_01s0127g00050 | EnsemblPlants:VIT_01s0127g00050.t01 | unigene:Vvi.1765 | RefSeq:XP_002266261 |
| RefSeq:XP_002266261.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:7385836..7387210
Molecular Weight (calculated)
23832.1 Da
IEP (calculated)
8.192
GRAVY (calculated)
-0.198
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKVLLVLIA YLSFLVVSGH AIDSPQYTVV HSQSDFQIRL YRQSSWMSAT VHGTSFNKST KDAFHRLYKY IHGANLNSSQ FAITAPVLTS VTPSALGSEY
101: TVRFFFSPKY EESPPQPYPE LNLQFDKWRS HCVAVRVFPG FAKDDTISKE IKALETSLDD YLFGKSAVLE EKNSYTIAQY NASYHPTGRV NEVWLNISGL
201: TAEGCPSYGG KY
101: TVRFFFSPKY EESPPQPYPE LNLQFDKWRS HCVAVRVFPG FAKDDTISKE IKALETSLDD YLFGKSAVLE EKNSYTIAQY NASYHPTGRV NEVWLNISGL
201: TAEGCPSYGG KY
001: MATGLGFFKL SFLLSLLSGG SDLLGPDAES GVAQIGKFPP SCNRIECPSY ELVHSGNGYE IRRYNNTVWV STEPIPDISL VDATRTAFFQ LFAYIQGKNE
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
Arabidopsis Description
HBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6J0]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.