Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0127g00050.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 38.17 | 47.17 |
| GSMUA_Achr7P14630_001 | Banana | vacuole | 34.35 | 41.47 |
| Os01t0235300-01 | Rice | extracellular | 31.68 | 38.78 |
| TraesCS3A01G158300.1 | Wheat | extracellular, plasma membrane | 31.3 | 38.14 |
| HORVU3Hr1G057370.2 | Barley | endoplasmic reticulum, plasma membrane | 31.3 | 37.96 |
| EES02177 | Sorghum | endoplasmic reticulum, extracellular | 31.68 | 37.9 |
| TraesCS3D01G166000.1 | Wheat | extracellular, plasma membrane | 30.92 | 37.67 |
| KRH03257 | Soybean | endoplasmic reticulum, extracellular | 30.15 | 37.09 |
| Zm00001d039273_P001 | Maize | extracellular | 30.15 | 34.8 |
| HORVU3Hr1G057380.2 | Barley | mitochondrion, plastid | 31.3 | 33.88 |
| KRH55053 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 22.9 | 29.41 |
| KRH55052 | Soybean | endoplasmic reticulum, plasma membrane | 22.14 | 28.43 |
| KRH69318 | Soybean | endoplasmic reticulum | 24.05 | 26.92 |
| KRH74808 | Soybean | nucleus | 23.66 | 26.5 |
| KRH13575 | Soybean | endoplasmic reticulum, vacuole | 22.9 | 25.1 |
| KRH21801 | Soybean | endoplasmic reticulum, vacuole | 18.32 | 21.24 |
Protein Annotations
| EMBL:ACUP02011047 | EnsemblPlants:KRG99406 | EnsemblPlantsGene:GLYMA_18G142600 | Gene3D:1.20.1250.20 | Gene3D:3.20.80.10 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR011256 | InterPro:Reg_factor_effector_dom_sf | InterPro:SOUL_haem-bd | PANTHER:PTHR11220 |
| PANTHER:PTHR11220:SF36 | PFAM:PF04832 | ProteinID:KRG99406 | ProteinID:KRG99406.1 | SUPFAM:SSF55136 | TMHMM:TMhelix |
| UniParc:UPI0006ED8A9A | UniProt:A0A0R0FBD0 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:22404649..22412812
Molecular Weight (calculated)
30192.2 Da
IEP (calculated)
8.283
GRAVY (calculated)
-0.151
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIGLFISIF SMVAATILEL IRLRMVRRHD YYQLEEIPMI IFWQFRREDN QAEMETTLVR FLYYLSTAIL FWCCANIVHA IELPNYTVIL PEESDFQLRL
101: YNESSWISAR VSGTSFEQSY KLGFSRLYQY IHGANSNSSK IAFTAPVLTS VPSSPPGDGY IVRMFVSTHF QGKPPQPNPE LKLRIEKWKT QCIAVRKFTG
201: YAKDDNINKE IEALVTTLNK NSATIQDTSF YTIAKYNASS HNTADRLNEV WIKVSGVRTE YC
101: YNESSWISAR VSGTSFEQSY KLGFSRLYQY IHGANSNSSK IAFTAPVLTS VPSSPPGDGY IVRMFVSTHF QGKPPQPNPE LKLRIEKWKT QCIAVRKFTG
201: YAKDDNINKE IEALVTTLNK NSATIQDTSF YTIAKYNASS HNTADRLNEV WIKVSGVRTE YC
001: MATGLGFFKL SFLLSLLSGG SDLLGPDAES GVAQIGKFPP SCNRIECPSY ELVHSGNGYE IRRYNNTVWV STEPIPDISL VDATRTAFFQ LFAYIQGKNE
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
Arabidopsis Description
HBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6J0]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.