Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G17100.1 | KRH14106 | AT5G35750.1 | 18642946 |
| AT1G17100.1 | KRH74010 | AT5G35750.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH13575 | Soybean | endoplasmic reticulum, vacuole | 70.8 | 66.95 |
| KRH69318 | Soybean | endoplasmic reticulum | 58.41 | 56.41 |
| KRH74808 | Soybean | nucleus | 57.08 | 55.13 |
| PGSC0003DMT400071037 | Potato | extracellular | 50.0 | 51.13 |
| VIT_19s0140g00210.t01 | Wine grape | endoplasmic reticulum, vacuole | 50.44 | 50.22 |
| GSMUA_Achr2P20070_001 | Banana | endoplasmic reticulum, extracellular | 47.79 | 49.32 |
| Bra026004.1-P | Field mustard | extracellular | 50.0 | 48.92 |
| CDY65124 | Canola | extracellular | 50.0 | 48.92 |
| Zm00001d039387_P001 | Maize | extracellular | 46.9 | 48.62 |
| Solyc07g061790.2.1 | Tomato | extracellular | 49.12 | 48.47 |
| TraesCS3A01G132700.1 | Wheat | extracellular | 46.02 | 48.37 |
| CDY48464 | Canola | endoplasmic reticulum, vacuole | 49.12 | 48.05 |
| AT1G17100.1 | Thale cress | extracellular | 49.12 | 47.84 |
| CDX88448 | Canola | endoplasmic reticulum, extracellular | 47.35 | 47.56 |
| TraesCS3D01G149000.1 | Wheat | extracellular | 46.46 | 47.51 |
| EES00077 | Sorghum | extracellular | 46.02 | 47.06 |
| Solyc07g061800.2.1 | Tomato | extracellular | 45.58 | 46.4 |
| TraesCS3B01G166900.1 | Wheat | golgi | 45.13 | 46.15 |
| Os01t0210500-01 | Rice | extracellular | 44.25 | 45.87 |
| CDY52440 | Canola | endoplasmic reticulum, extracellular | 47.35 | 45.73 |
| Bra035039.1-P | Field mustard | endoplasmic reticulum, extracellular | 47.35 | 45.73 |
| KRH55052 | Soybean | endoplasmic reticulum, plasma membrane | 39.82 | 44.12 |
| KRH55053 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 39.38 | 43.63 |
| AT1G78450.1 | Thale cress | extracellular | 40.27 | 40.44 |
| CDY52439 | Canola | extracellular | 34.51 | 35.45 |
| Bra035040.1-P | Field mustard | extracellular | 34.51 | 35.45 |
| AT1G78460.1 | Thale cress | endoplasmic reticulum, extracellular | 29.65 | 30.59 |
| KRH03257 | Soybean | endoplasmic reticulum, extracellular | 23.01 | 24.41 |
| KRG99406 | Soybean | extracellular | 21.24 | 18.32 |
Protein Annotations
| EMBL:ACUP02008364 | EnsemblPlants:KRH21801 | EnsemblPlantsGene:GLYMA_13G259600 | Gene3D:3.20.80.10 | InterPro:IPR011256 | InterPro:Reg_factor_effector_dom_sf |
| InterPro:SOUL_haem-bd | PANTHER:PTHR11220 | PANTHER:PTHR11220:SF25 | PFAM:PF04832 | ProteinID:KRH21801 | ProteinID:KRH21801.1 |
| SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF55136 | TMHMM:TMhelix | UniParc:UPI000294CEB3 | UniProt:K7M1Y8 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:36410492..36411937
Molecular Weight (calculated)
25387.5 Da
IEP (calculated)
9.408
GRAVY (calculated)
-0.000
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASTIITLK FSFLLSLLLS VSLLGGVRTI PPTCNRIECP THDVIESTSP IQDISLVQAT RTGFRKFILS HNSFAIANAT YRIIIFARKT FNKGCLFDYI
101: QGKNNYKQRI EMIAPVITEV SPSDGSFCKS SFVFSFFVPK LNQANPPPAK GLRVQRWNNV YVAARQFAAA LRASIAGTEW SSAIDKSHRA GHASVYTVAQ
201: YNDPFEYENV NEIWFLFEME SERHAM
101: QGKNNYKQRI EMIAPVITEV SPSDGSFCKS SFVFSFFVPK LNQANPPPAK GLRVQRWNNV YVAARQFAAA LRASIAGTEW SSAIDKSHRA GHASVYTVAQ
201: YNDPFEYENV NEIWFLFEME SERHAM
001: MATGLGFFKL SFLLSLLSGG SDLLGPDAES GVAQIGKFPP SCNRIECPSY ELVHSGNGYE IRRYNNTVWV STEPIPDISL VDATRTAFFQ LFAYIQGKNE
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
Arabidopsis Description
HBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6J0]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.