Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G17100.1 | KRH14106 | AT5G35750.1 | 18642946 |
| AT1G17100.1 | KRH74010 | AT5G35750.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH21801 | Soybean | endoplasmic reticulum, vacuole | 66.95 | 70.8 |
| KRH69318 | Soybean | endoplasmic reticulum | 66.53 | 67.95 |
| KRH74808 | Soybean | nucleus | 64.85 | 66.24 |
| VIT_19s0140g00210.t01 | Wine grape | endoplasmic reticulum, vacuole | 58.58 | 61.67 |
| GSMUA_Achr2P20070_001 | Banana | endoplasmic reticulum, extracellular | 55.23 | 60.27 |
| PGSC0003DMT400071037 | Potato | extracellular | 54.39 | 58.82 |
| CDX88448 | Canola | endoplasmic reticulum, extracellular | 54.81 | 58.22 |
| Bra026004.1-P | Field mustard | extracellular | 56.07 | 58.01 |
| CDY65124 | Canola | extracellular | 56.07 | 58.01 |
| CDY48464 | Canola | endoplasmic reticulum, vacuole | 55.65 | 57.58 |
| TraesCS3D01G149000.1 | Wheat | extracellular | 52.72 | 57.01 |
| AT1G17100.1 | Thale cress | extracellular | 54.39 | 56.03 |
| Solyc07g061790.2.1 | Tomato | extracellular | 53.56 | 55.9 |
| TraesCS3A01G132700.1 | Wheat | extracellular | 50.21 | 55.81 |
| TraesCS3B01G166900.1 | Wheat | golgi | 51.46 | 55.66 |
| Os01t0210500-01 | Rice | extracellular | 50.63 | 55.5 |
| Zm00001d039387_P001 | Maize | extracellular | 49.79 | 54.59 |
| Solyc07g061800.2.1 | Tomato | extracellular | 50.21 | 54.05 |
| KRH55052 | Soybean | endoplasmic reticulum, plasma membrane | 46.03 | 53.92 |
| KRH55053 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 46.03 | 53.92 |
| CDY52440 | Canola | endoplasmic reticulum, extracellular | 52.72 | 53.85 |
| Bra035039.1-P | Field mustard | endoplasmic reticulum, extracellular | 52.72 | 53.85 |
| EES00077 | Sorghum | extracellular | 49.37 | 53.39 |
| AT1G78450.1 | Thale cress | extracellular | 44.77 | 47.56 |
| CDY52439 | Canola | extracellular | 42.26 | 45.91 |
| Bra035040.1-P | Field mustard | extracellular | 42.26 | 45.91 |
| AT1G78460.1 | Thale cress | endoplasmic reticulum, extracellular | 35.56 | 38.81 |
| KRH03257 | Soybean | endoplasmic reticulum, extracellular | 27.2 | 30.52 |
| KRG99406 | Soybean | extracellular | 25.1 | 22.9 |
Protein Annotations
| EMBL:ACUP02009748 | EnsemblPlants:KRH13575 | EnsemblPlantsGene:GLYMA_15G248300 | EntrezGene:100814754 | Gene3D:3.20.80.10 | InterPro:IPR011256 |
| InterPro:Reg_factor_effector_dom_sf | InterPro:SOUL_haem-bd | PANTHER:PTHR11220 | PANTHER:PTHR11220:SF25 | PFAM:PF04832 | ProteinID:KRH13575 |
| ProteinID:KRH13575.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF55136 | UniParc:UPI000233BB85 | UniProt:I1MJ14 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr15:-:47343929..47345896
Molecular Weight (calculated)
26795.8 Da
IEP (calculated)
8.776
GRAVY (calculated)
-0.308
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAASTMITL KFSFLWSLLL SVSLLGVKSS HSHQNGGRRT IPPTCKRIEC PTHDVIEVGD GYEIRRYNNN STVWMSTSPI QDISLVEATR TGFRSLFDYI
101: QGKNNYKQKI EMTAPVITEV SPSDGPFCKS SFVVSFFVPK LNQANPPPAK GLHVQRWNNM YVAARQFGGH VNDSNVAVEA AVLRASIEGT KWSGAIDKNQ
201: KAGHASVYTV AQYNDPFEYQ NRVNEIWFLF EMESERHAI
101: QGKNNYKQKI EMTAPVITEV SPSDGPFCKS SFVVSFFVPK LNQANPPPAK GLHVQRWNNM YVAARQFGGH VNDSNVAVEA AVLRASIEGT KWSGAIDKNQ
201: KAGHASVYTV AQYNDPFEYQ NRVNEIWFLF EMESERHAI
001: MATGLGFFKL SFLLSLLSGG SDLLGPDAES GVAQIGKFPP SCNRIECPSY ELVHSGNGYE IRRYNNTVWV STEPIPDISL VDATRTAFFQ LFAYIQGKNE
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
Arabidopsis Description
HBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6J0]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.