Factsheet for TraesCS3A01G132700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 5
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G149000.1	Wheat	extracellular	98.14	95.48
TraesCS3B01G166900.1	Wheat	golgi	96.74	94.12
Os01t0210500-01	Rice	extracellular	85.58	84.4
Zm00001d039387_P001	Maize	extracellular	82.79	81.65
EES00077	Sorghum	extracellular	82.79	80.54
GSMUA_Achr2P20070_001	Banana	endoplasmic reticulum, extracellular	63.72	62.56
VIT_19s0140g00210.t01	Wine grape	endoplasmic reticulum, vacuole	60.93	57.71
PGSC0003DMT400071037	Potato	extracellular	57.21	55.66
KRH74808	Soybean	nucleus	60.0	55.13
KRH69318	Soybean	endoplasmic reticulum	59.53	54.7
AT1G17100.1	Thale cress	extracellular	58.14	53.88
Solyc07g061790.2.1	Tomato	extracellular	57.21	53.71
Bra026004.1-P	Field mustard	extracellular	57.21	53.25
CDY65124	Canola	extracellular	57.21	53.25
CDY48464	Canola	endoplasmic reticulum, vacuole	56.74	52.81
CDX88448	Canola	endoplasmic reticulum, extracellular	54.88	52.44
Solyc07g061800.2.1	Tomato	extracellular	53.95	52.25
KRH13575	Soybean	endoplasmic reticulum, vacuole	55.81	50.21
CDY52440	Canola	endoplasmic reticulum, extracellular	54.42	50.0
Bra035039.1-P	Field mustard	endoplasmic reticulum, extracellular	54.42	50.0
KRH55053	Soybean	endoplasmic reticulum, extracellular, plasma membrane	46.51	49.02
KRH55052	Soybean	endoplasmic reticulum, plasma membrane	46.05	48.53
KRH21801	Soybean	endoplasmic reticulum, vacuole	48.37	46.02
AT1G78450.1	Thale cress	extracellular	44.19	42.22
CDY52439	Canola	extracellular	38.6	37.73
Bra035040.1-P	Field mustard	extracellular	38.6	37.73
TraesCS3A01G158300.1	Wheat	extracellular, plasma membrane	35.81	35.81
AT1G78460.1	Thale cress	endoplasmic reticulum, extracellular	34.88	34.25

Protein Annotations

EnsemblPlants:TraesCS3A01G132700.1	EnsemblPlantsGene:TraesCS3A01G132700	Gene3D:3.20.80.10	InterPro:IPR011256	InterPro:Reg_factor_effector_dom_sf	InterPro:SOUL_haem-bd
PANTHER:PTHR11220	PANTHER:PTHR11220:SF25	PFAM:PF04832	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF55136
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:109868215..109869155

Molecular Weight (calculated)

23188.5 Da

IEP (calculated)

4.588

GRAVY (calculated)

0.035

Length

215 amino acids

Sequence
(BLAST)

001: MLLLLAAAAL LAAGAGAAVP PSCERIECPA YDVVDSANGF EIRRYKDAMW VSTAPIEDIS LVDATRSGFL QLFKYIQGKN AYNETIEMTA PVLTRVAPSD
101: GPFCVSSFVV SFYVPAKNQA DPPPAEGLRV QRWAGARYAA VRRFGGFVAD ADVGKQAALL EASLQGTRWA APVSDGRKAD PASEYTVAQY NSPFEFSGRV
201: NEIWMLFDTM AASDM

Best Arabidopsis Sequence Match ( AT1G17100.1 )
(BLAST)

001: MATGLGFFKL SFLLSLLSGG SDLLGPDAES GVAQIGKFPP SCNRIECPSY ELVHSGNGYE IRRYNNTVWV STEPIPDISL VDATRTAFFQ LFAYIQGKNE
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV

Arabidopsis Description

HBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6J0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.