Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 7
- vacuole 4
- plasma membrane 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026004.1-P | Field mustard | extracellular | 83.19 | 83.55 |
| CDY65124 | Canola | extracellular | 83.19 | 83.55 |
| CDY48464 | Canola | endoplasmic reticulum, vacuole | 82.33 | 82.68 |
| VIT_19s0140g00210.t01 | Wine grape | endoplasmic reticulum, vacuole | 59.48 | 60.79 |
| Os01t0210500-01 | Rice | extracellular | 55.6 | 59.17 |
| AT1G78450.1 | Thale cress | extracellular | 57.33 | 59.11 |
| PGSC0003DMT400071037 | Potato | extracellular | 56.03 | 58.82 |
| TraesCS3D01G149000.1 | Wheat | extracellular | 55.6 | 58.37 |
| TraesCS3A01G132700.1 | Wheat | extracellular | 53.88 | 58.14 |
| GSMUA_Achr2P20070_001 | Banana | endoplasmic reticulum, extracellular | 54.74 | 57.99 |
| EES00077 | Sorghum | extracellular | 54.74 | 57.47 |
| TraesCS3B01G166900.1 | Wheat | golgi | 54.74 | 57.47 |
| Zm00001d039387_P001 | Maize | extracellular | 53.45 | 56.88 |
| KRH74808 | Soybean | nucleus | 56.9 | 56.41 |
| KRH69318 | Soybean | endoplasmic reticulum | 56.47 | 55.98 |
| Solyc07g061790.2.1 | Tomato | extracellular | 54.74 | 55.46 |
| Solyc07g061800.2.1 | Tomato | extracellular | 53.02 | 55.41 |
| KRH13575 | Soybean | endoplasmic reticulum, vacuole | 56.03 | 54.39 |
| KRH55053 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 44.4 | 50.49 |
| KRH55052 | Soybean | endoplasmic reticulum, plasma membrane | 44.4 | 50.49 |
| KRH21801 | Soybean | endoplasmic reticulum, vacuole | 47.84 | 49.12 |
| AT1G78460.1 | Thale cress | endoplasmic reticulum, extracellular | 37.5 | 39.73 |
Protein Annotations
| Gene3D:3.20.80.10 | MapMan:35.2 | EntrezGene:838280 | UniProt:A0A178W6J0 | ProteinID:AAD50021.1 | ProteinID:AEE29541.1 |
| ArrayExpress:AT1G17100 | EnsemblPlantsGene:AT1G17100 | RefSeq:AT1G17100 | TAIR:AT1G17100 | RefSeq:AT1G17100-TAIR-G | EnsemblPlants:AT1G17100.1 |
| TAIR:AT1G17100.1 | EMBL:AY086962 | Unigene:At.21016 | EMBL:BT024615 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0020037 | InterPro:IPR011256 | RefSeq:NP_173153.1 | ProteinID:OAP13105.1 |
| PFAM:PF04832 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11220 | PANTHER:PTHR11220:SF25 | UniProt:Q9SHG8 |
| InterPro:Reg_factor_effector_dom_sf | InterPro:SOUL_haem-bd | SUPFAM:SSF55136 | SignalP:SignalP-noTM | UniParc:UPI00000A6191 | SEG:seg |
Description
HBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6J0]
Coordinates
chr1:+:5844646..5845661
Molecular Weight (calculated)
25389.6 Da
IEP (calculated)
4.543
GRAVY (calculated)
-0.225
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGLGFFKL SFLLSLLSGG SDLLGPDAES GVAQIGKFPP SCNRIECPSY ELVHSGNGYE IRRYNNTVWV STEPIPDISL VDATRTAFFQ LFAYIQGKNE
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.