CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	golgi, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039387_P001	Maize	extracellular	91.4	92.66
Os01t0210500-01	Rice	extracellular	82.81	83.94
TraesCS3A01G132700.1	Wheat	extracellular	80.54	82.79
TraesCS3D01G149000.1	Wheat	extracellular	82.35	82.35
TraesCS3B01G166900.1	Wheat	golgi	81.45	81.45
GSMUA_Achr2P20070_001	Banana	endoplasmic reticulum, extracellular	61.99	62.56
VIT_19s0140g00210.t01	Wine grape	endoplasmic reticulum, vacuole	58.37	56.83
PGSC0003DMT400071037	Potato	extracellular	55.66	55.66
KRH74808	Soybean	nucleus	58.82	55.56
KRH69318	Soybean	endoplasmic reticulum	58.37	55.13
Bra026004.1-P	Field mustard	extracellular	57.47	54.98
CDY65124	Canola	extracellular	57.47	54.98
AT1G17100.1	Thale cress	extracellular	57.47	54.74
Solyc07g061790.2.1	Tomato	extracellular	56.56	54.59
CDY48464	Canola	endoplasmic reticulum, vacuole	57.01	54.55
CDX88448	Canola	endoplasmic reticulum, extracellular	54.3	53.33
Solyc07g061800.2.1	Tomato	extracellular	52.04	51.8
Bra035039.1-P	Field mustard	endoplasmic reticulum, extracellular	53.85	50.85
CDY52440	Canola	endoplasmic reticulum, extracellular	53.85	50.85
KRH13575	Soybean	endoplasmic reticulum, vacuole	53.39	49.37
KRH55053	Soybean	endoplasmic reticulum, extracellular, plasma membrane	44.8	48.53
KRH55052	Soybean	endoplasmic reticulum, plasma membrane	43.89	47.55
KRH21801	Soybean	endoplasmic reticulum, vacuole	47.06	46.02
AT1G78450.1	Thale cress	extracellular	43.89	43.11
CDY52439	Canola	extracellular	38.46	38.64
Bra035040.1-P	Field mustard	extracellular	38.46	38.64
EES02177	Sorghum	endoplasmic reticulum, extracellular	38.01	38.36
AT1G78460.1	Thale cress	endoplasmic reticulum, extracellular	34.84	35.16

Protein Annotations

EnsemblPlants:EES00077	EnsemblPlantsGene:SORBI_3003G022300	EntrezGene:8079524	Gene3D:3.20.80.10	InterPro:IPR011256	InterPro:Reg_factor_effector_dom_sf
InterPro:SOUL_haem-bd	PANTHER:PTHR11220	PANTHER:PTHR11220:SF25	PFAM:PF04832	ProteinID:EES00077	ProteinID:EES00077.1
RefSeq:XP_002454957.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF55136	TMHMM:TMhelix	unigene:Sbi.3447
UniParc:UPI0001A8434D	UniProt:C5XL40	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:1922735..1926812

Molecular Weight (calculated)

23806.0 Da

IEP (calculated)

4.394

GRAVY (calculated)

0.044

Length

221 amino acids

Sequence
(BLAST)

001: MARRGSLLAV AAALLVAVVA AAVPPTCERI ECPAYEVVDS ANGFEIRRYT DAMWITTAPI EDISFVAATR TGFLQLFNYI QGKNLYNETI EMTAPVLTQV
101: SPSDGPFCAS SFTVSFYVPA KNQADPPPAE GLRVDRWAGA RYAAVRRFGG FVADADVGEQ AAQLDASLQG TRWAAAVNDA RRADPASPYT VAQYNSPFEF
201: SGRVNEIWML FDDAAAAATS M

Best Arabidopsis Sequence Match ( AT1G17100.1 )
(BLAST)

001: MATGLGFFKL SFLLSLLSGG SDLLGPDAES GVAQIGKFPP SCNRIECPSY ELVHSGNGYE IRRYNNTVWV STEPIPDISL VDATRTAFFQ LFAYIQGKNE
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV

Arabidopsis Description

HBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6J0]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.