Factsheet for Bra035040.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	golgi, nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52439	Canola	extracellular	100.0	100.0
AT1G78460.1	Thale cress	endoplasmic reticulum, extracellular	67.27	67.58
Bra026004.1-P	Field mustard	extracellular	49.09	46.75
VIT_19s0140g00210.t01	Wine grape	endoplasmic reticulum, vacuole	46.36	44.93
PGSC0003DMT400071037	Potato	extracellular	44.55	44.34
Solyc07g061800.2.1	Tomato	extracellular	44.09	43.69
Solyc07g061790.2.1	Tomato	extracellular	45.0	43.23
Bra035039.1-P	Field mustard	endoplasmic reticulum, extracellular	45.45	42.73
KRH55052	Soybean	endoplasmic reticulum, plasma membrane	39.55	42.65
KRH69318	Soybean	endoplasmic reticulum	45.0	42.31
KRH74808	Soybean	nucleus	45.0	42.31
KRH13575	Soybean	endoplasmic reticulum, vacuole	45.91	42.26
KRH55053	Soybean	endoplasmic reticulum, extracellular, plasma membrane	39.09	42.16
GSMUA_Achr2P20070_001	Banana	endoplasmic reticulum, extracellular	41.36	41.55
TraesCS3A01G132700.1	Wheat	extracellular	37.73	38.6
TraesCS3D01G149000.1	Wheat	extracellular	38.64	38.46
EES00077	Sorghum	extracellular	38.64	38.46
Os01t0210500-01	Rice	extracellular	37.73	38.07
Zm00001d039387_P001	Maize	extracellular	37.73	38.07
TraesCS3B01G166900.1	Wheat	golgi	37.73	37.56
KRH21801	Soybean	endoplasmic reticulum, vacuole	35.45	34.51

Protein Annotations

EnsemblPlants:Bra035040.1	EnsemblPlants:Bra035040.1-P	EnsemblPlantsGene:Bra035040	Gene3D:3.20.80.10	InterPro:IPR011256	InterPro:Reg_factor_effector_dom_sf
InterPro:SOUL_haem-bd	PANTHER:PTHR11220	PANTHER:PTHR11220:SF25	PFAM:PF04832	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF55136	TMHMM:TMhelix	UniParc:UPI0002541BFD	UniProt:M4F1U3	MapMan:35.2	:

Description

AT1G78460 (E=4e-083) | SOUL heme-binding family protein

Coordinates

chrA07:-:21912876..21913799

Molecular Weight (calculated)

24842.0 Da

IEP (calculated)

8.404

GRAVY (calculated)

-0.248

Length

220 amino acids

Sequence
(BLAST)

001: METGLTILKL SFFLGLVVVV SCSQAPAPWN PSMGMRPGTC DHYECPTYKL VQAGYGYEIR MYNSAVWMST DPITAQSMTQ GTKTGFQRLF RYIQGDNKSK
101: IKMNMTAPVI TQITPGAEMY MYTVSFYIPK KNQQTPPLAD DLHVQSWKPT YVAVRQIGGY VTDDLAIKEA VALMDSLNGT EWKFHIEKSK GKQPDYFVAD
201: YNPPFQTTAR VNEILVPFNM

Best Arabidopsis Sequence Match ( AT1G78460.1 )
(BLAST)

001: METGLNILKL SLCVSLVVVG SYAQAPAPWN PSNGFRPGTC DHYECPTYKL VEAGYGFEIR MYDAALWIST SPIPSLSMTQ ATKTGFRRLN RYIEGDNKSN
101: VKMNMTAPVI AQATPGRSVY TVSLYLPKKN QQNPPQADDL HVRSTKPTYV AVRQIGGYVS NNVAKDEAAA LMESLRDSNW ILPIEKSKGK LPAYFLAVYN
201: PPSHTTARVI NEIMVPFNM

Arabidopsis Description

AT1G78460 protein [Source:UniProtKB/TrEMBL;Acc:Q9SYN5]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.