Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G17100.1 | KRH14106 | AT5G35750.1 | 18642946 |
| AT1G17100.1 | KRH74010 | AT5G35750.1 | 18642946 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH55052 | Soybean | endoplasmic reticulum, plasma membrane | 97.06 | 97.06 |
| KRH69318 | Soybean | endoplasmic reticulum | 59.8 | 52.14 |
| KRH74808 | Soybean | nucleus | 58.33 | 50.85 |
| VIT_19s0140g00210.t01 | Wine grape | endoplasmic reticulum, vacuole | 51.96 | 46.7 |
| TraesCS3D01G149000.1 | Wheat | extracellular | 50.49 | 46.61 |
| TraesCS3A01G132700.1 | Wheat | extracellular | 49.02 | 46.51 |
| Os01t0210500-01 | Rice | extracellular | 49.51 | 46.33 |
| KRH13575 | Soybean | endoplasmic reticulum, vacuole | 53.92 | 46.03 |
| TraesCS3B01G166900.1 | Wheat | golgi | 49.51 | 45.7 |
| PGSC0003DMT400071037 | Potato | extracellular | 49.02 | 45.25 |
| Zm00001d039387_P001 | Maize | extracellular | 48.04 | 44.95 |
| CDX88448 | Canola | endoplasmic reticulum, extracellular | 49.51 | 44.89 |
| EES00077 | Sorghum | extracellular | 48.53 | 44.8 |
| GSMUA_Achr2P20070_001 | Banana | endoplasmic reticulum, extracellular | 48.04 | 44.75 |
| AT1G17100.1 | Thale cress | extracellular | 50.49 | 44.4 |
| CDY65124 | Canola | extracellular | 49.51 | 43.72 |
| CDY48464 | Canola | endoplasmic reticulum, vacuole | 49.51 | 43.72 |
| Bra026004.1-P | Field mustard | extracellular | 49.51 | 43.72 |
| Solyc07g061790.2.1 | Tomato | extracellular | 49.02 | 43.67 |
| CDY52440 | Canola | endoplasmic reticulum, extracellular | 50.0 | 43.59 |
| Bra035039.1-P | Field mustard | endoplasmic reticulum, extracellular | 50.0 | 43.59 |
| Solyc07g061800.2.1 | Tomato | extracellular | 47.06 | 43.24 |
| AT1G78450.1 | Thale cress | extracellular | 43.63 | 39.56 |
| KRH21801 | Soybean | endoplasmic reticulum, vacuole | 43.63 | 39.38 |
| CDY52439 | Canola | extracellular | 42.16 | 39.09 |
| Bra035040.1-P | Field mustard | extracellular | 42.16 | 39.09 |
| AT1G78460.1 | Thale cress | endoplasmic reticulum, extracellular | 35.78 | 33.33 |
| KRH03257 | Soybean | endoplasmic reticulum, extracellular | 29.9 | 28.64 |
| KRG99406 | Soybean | extracellular | 29.41 | 22.9 |
Protein Annotations
| EMBL:ACUP02003868 | EnsemblPlants:KRH55053 | EnsemblPlantsGene:GLYMA_06G227000 | EntrezGene:100778881 | Gene3D:3.20.80.10 | InterPro:IPR011256 |
| InterPro:Reg_factor_effector_dom_sf | InterPro:SOUL_haem-bd | PANTHER:PTHR11220 | PANTHER:PTHR11220:SF25 | PFAM:PF04832 | ProteinID:KRH55053 |
| ProteinID:KRH55053.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF55136 | UniParc:UPI0001BA539E | UniProt:K7KWR1 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:+:34205207..34206431
Molecular Weight (calculated)
22966.5 Da
IEP (calculated)
9.366
GRAVY (calculated)
-0.059
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSSTLQFP ILLGLLLISF LGVEGVLPPS CNRYECPNYN VKYVGKNFEI RRYNSPVWIS NLAVQDPSLV GATRSGFKRL FSYIYGNNNY KKEMNMTTPV
101: ISEVSINGGN SSIVVSFYVP KVNQADPPLA NGLYVQRWKT IDVAVRQFGG FVKDSNIGLQ VSALNDSLTG TTWSAIVKNK YIVAQYNSPF ELYNRVNEIW
201: FFYE
101: ISEVSINGGN SSIVVSFYVP KVNQADPPLA NGLYVQRWKT IDVAVRQFGG FVKDSNIGLQ VSALNDSLTG TTWSAIVKNK YIVAQYNSPF ELYNRVNEIW
201: FFYE
001: MATGLGFFKL SFLLSLLSGG SDLLGPDAES GVAQIGKFPP SCNRIECPSY ELVHSGNGYE IRRYNNTVWV STEPIPDISL VDATRTAFFQ LFAYIQGKNE
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
101: YHQKIEMTAP VISQVSPSDG PFCESSFTVS FYVPKKNQPD PAPSENLHIQ KWNSRYVAVR QFSGFVSDDS IGEQAAALDS SLKGTAWANA IAKSKEDGGV
201: GSDSAYTVAQ YNSPFEFSGR VNEIWLPFEL DV
Arabidopsis Description
HBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W6J0]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.