Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P18160_001 | Banana | nucleus | 13.44 | 10.37 |
| PGSC0003DMT400002636 | Potato | extracellular | 7.26 | 6.75 |
| PGSC0003DMT400066146 | Potato | nucleus | 12.1 | 6.54 |
| PGSC0003DMT400002635 | Potato | cytosol | 5.11 | 5.83 |
| TraesCS7B01G319400.1 | Wheat | cytosol | 6.99 | 5.62 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400066206 | EnsemblPlantsGene:PGSC0003DMG403025764 | PANTHER:PTHR11076 | PANTHER:PTHR11076:SF12 | PGSC:PGSC0003DMG403025764 | SEG:seg |
| UniParc:UPI000294BA00 | UniProt:M1CF67 | MapMan:35.1 | : | : | : |
Description
Deoxycytidyl transferase [Source:PGSC_GENE;Acc:PGSC0003DMG403025764]
Coordinates
chr1:+:83940934..83943100
Molecular Weight (calculated)
41047.6 Da
IEP (calculated)
4.593
GRAVY (calculated)
-0.194
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLQVSKLET ADSSKQGKEI YSIRSWLTAP STKTNNQNRS SSHEKANSKS SVDERQAQLQ GDSSTPFIEM TAASPSGTAG TLPPMNELDI GVIESLPLEV
101: FSEINDMYNG KLAHFINEKR SKGVSGKENI SSVCPAAPGE AFAAHEYNEE EIQVVSYPNK LFADMKSETL SEASVPNMDV VINAPVSGGI SLMPSSLSQV
201: DTSVFQELPE ELRTDILELL PAHRNTEASL DASLVCANNQ NCSPSISSID LWVGNPPEWI DIFKASNCQI LCVLAEMYQR AGAKKQLSSV LQRTMYQIYI
301: LPDVGTDGWD EAVSCLCELI KQYLKLKIST DIEEVYICSC LLRRYVHETT RICSMCSFSS AHLFSWHLLL YF
101: FSEINDMYNG KLAHFINEKR SKGVSGKENI SSVCPAAPGE AFAAHEYNEE EIQVVSYPNK LFADMKSETL SEASVPNMDV VINAPVSGGI SLMPSSLSQV
201: DTSVFQELPE ELRTDILELL PAHRNTEASL DASLVCANNQ NCSPSISSID LWVGNPPEWI DIFKASNCQI LCVLAEMYQR AGAKKQLSSV LQRTMYQIYI
301: LPDVGTDGWD EAVSCLCELI KQYLKLKIST DIEEVYICSC LLRRYVHETT RICSMCSFSS AHLFSWHLLL YF
0001: MKRSLGSNSS NNSGSGSNKK SKKNNNPSNQ KTLGAAWGAA SSRSSFRSSP FSDFGSYMEV KNRKLQNQFE TEASAASRGV SGSEKLIFQG VSIFVDGFTI
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VFILVQHFLQ CLCKEVSLRL QGCEMIGRTF TLKIKKRKKD AEEPTKYMGC GDCDNLSRSI TVPAATDDIE
0701: VLQRISKKLF GSFCLDVKEV RGVGLQVSKL DSADPSNKGS RTLKSWLSSA PAVVQIEQDD NVFAAKVREN SDCNRPVTGG VSRLRESNSE ESSIQSGDTN
0801: SSLPPMCYLD MEVLENLPPE LLSELDGTYG GKLFELIEKK RGKRRINCNS PHVSLDGTAA SIKELKSLSV KIHGLSTSGE KEYKEPYVPH PSIARTSNQH
0901: TIEMTDLLPS SLSQVDVSVL QELPEELRAD VLGAFPSHRR QQSSSDVPKE TCKKQDEEPI DLKGTENEIG LSFSSLWFGN PPLWTEKFKV SGNCTMEKLS
1001: AIYFKVAQSR PMLSLVLQHA ISEMSSFPDA ASASDLDKAI YDVCELLKQY INLKVGGDIE EIYLCFRLLK RLAARSQLFL QVYEILSPFI QASISEHYGG
1101: SLSIP
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VFILVQHFLQ CLCKEVSLRL QGCEMIGRTF TLKIKKRKKD AEEPTKYMGC GDCDNLSRSI TVPAATDDIE
0701: VLQRISKKLF GSFCLDVKEV RGVGLQVSKL DSADPSNKGS RTLKSWLSSA PAVVQIEQDD NVFAAKVREN SDCNRPVTGG VSRLRESNSE ESSIQSGDTN
0801: SSLPPMCYLD MEVLENLPPE LLSELDGTYG GKLFELIEKK RGKRRINCNS PHVSLDGTAA SIKELKSLSV KIHGLSTSGE KEYKEPYVPH PSIARTSNQH
0901: TIEMTDLLPS SLSQVDVSVL QELPEELRAD VLGAFPSHRR QQSSSDVPKE TCKKQDEEPI DLKGTENEIG LSFSSLWFGN PPLWTEKFKV SGNCTMEKLS
1001: AIYFKVAQSR PMLSLVLQHA ISEMSSFPDA ASASDLDKAI YDVCELLKQY INLKVGGDIE EIYLCFRLLK RLAARSQLFL QVYEILSPFI QASISEHYGG
1101: SLSIP
Arabidopsis Description
REV1DNA repair protein REV1 [Source:UniProtKB/Swiss-Prot;Acc:A3EWL3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.