Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400066206 | Potato | cytosol, plastid | 10.37 | 13.44 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 11.41 | 12.17 |
| GSMUA_Achr10P... | Banana | nucleus | 15.98 | 10.89 |
| GSMUA_Achr10P... | Banana | cytosol | 10.79 | 7.91 |
| TraesCS7B01G319400.1 | Wheat | cytosol | 7.26 | 7.56 |
| GSMUA_Achr5P01740_001 | Banana | nucleus | 9.96 | 7.43 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P18160_001 | EnsemblPlants:GSMUA_Achr1T18160_001 | EnsemblPlantsGene:GSMUA_Achr1G18160_001 | Gene3D:3.40.50.10190 | InterPro:BRCT_dom | InterPro:BRCT_dom_sf |
| InterPro:IPR001357 | InterPro:IPR036420 | PANTHER:PTHR11076 | PANTHER:PTHR11076:SF12 | PFAM:PF16589 | PFscan:PS50172 |
| SMART:SM00292 | SUPFAM:SSF52113 | UniParc:UPI000296C6B8 | UniProt:M0S0X4 | MapMan:35.1 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G18160_001]
Coordinates
chr1:-:13591328..13596179
Molecular Weight (calculated)
54778.3 Da
IEP (calculated)
6.419
GRAVY (calculated)
-0.348
Length
482 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIKNRKLRE QFDAGASSSG KGIFSEISIF VDGFTVPPSQ ELRVFMLRHG GRYENYFSRR SVTHIICSHL PDNKMRNFRA FSRGLPVVRP AWVVDSVAAN
101: KLLSWVPYQL NELENGTFKQ QKLSSFFAPK CTSSPKIANA ESHIAPLVRS ASGLLLHKDE KMKQLLLDEE EKCSKFREQS MYVGDDKFFK VEYAELKFGK
201: MKDEHNITGA YPSSSCRNNR TLEESLDPLN FGHCNQQEEN LGAHHCLEDY AKGAMESDIH QIQLSTISHP RHDDLHINTC ADNHPDIVPQ SLSQLDFSVL
301: HELPEELKIG ILEALPPHRA ASFPGNGSGS TRKKFPCDIK DENSEKLDIF LWEGTPPSWV EKFQHSSCLL LNIIATQYSR SDMNGLLSLT LQSFSHILST
401: FTDLSAMESD ELISSLFELF KQYIELKVKS DIEELYVCFR ILRRFATDIK FLQQVYDLIL PFLQASISEN YGGILNLPIA KE
101: KLLSWVPYQL NELENGTFKQ QKLSSFFAPK CTSSPKIANA ESHIAPLVRS ASGLLLHKDE KMKQLLLDEE EKCSKFREQS MYVGDDKFFK VEYAELKFGK
201: MKDEHNITGA YPSSSCRNNR TLEESLDPLN FGHCNQQEEN LGAHHCLEDY AKGAMESDIH QIQLSTISHP RHDDLHINTC ADNHPDIVPQ SLSQLDFSVL
301: HELPEELKIG ILEALPPHRA ASFPGNGSGS TRKKFPCDIK DENSEKLDIF LWEGTPPSWV EKFQHSSCLL LNIIATQYSR SDMNGLLSLT LQSFSHILST
401: FTDLSAMESD ELISSLFELF KQYIELKVKS DIEELYVCFR ILRRFATDIK FLQQVYDLIL PFLQASISEN YGGILNLPIA KE
0001: MKRSLGSNSS NNSGSGSNKK SKKNNNPSNQ KTLGAAWGAA SSRSSFRSSP FSDFGSYMEV KNRKLQNQFE TEASAASRGV SGSEKLIFQG VSIFVDGFTI
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P
Arabidopsis Description
REV1DNA repair protein REV1 [Source:UniProtKB/Swiss-Prot;Acc:A3EWL3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.