Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G335900.1 | Wheat | plastid | 41.73 | 25.19 |
| TraesCS7A01G436200.3 | Wheat | plastid | 41.58 | 25.09 |
| Os06t0691000-01 | Rice | plastid | 39.89 | 25.07 |
| VIT_03s0091g00200.t01 | Wine grape | plastid | 41.44 | 24.94 |
| TraesCS7D01G426800.1 | Wheat | plastid | 41.44 | 24.94 |
| Solyc01g107510.2.1 | Tomato | nucleus | 36.63 | 24.78 |
| KXG20701 | Sorghum | plastid | 39.32 | 24.69 |
| KRH77949 | Soybean | plastid | 38.76 | 24.57 |
| Zm00001d014568_P023 | Maize | plastid | 39.18 | 24.54 |
| HORVU7Hr1G099700.8 | Barley | cytosol, mitochondrion, nucleus, plastid | 40.59 | 24.47 |
| CDY39397 | Canola | plastid | 35.08 | 23.46 |
| CDY60654 | Canola | plastid | 34.79 | 23.27 |
| AT5G44750.2 | Thale cress | plastid | 36.07 | 23.08 |
| Bra025106.1-P | Field mustard | plastid | 35.22 | 22.55 |
| GSMUA_Achr1P18160_001 | Banana | nucleus | 10.89 | 15.98 |
| GSMUA_Achr5P01740_001 | Banana | nucleus | 11.88 | 13.0 |
| GSMUA_Achr10P... | Banana | cytosol | 11.88 | 12.79 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 0.28 | 0.44 |
Protein Annotations
| KEGG:00230+2.7.7.7 | KEGG:00240+2.7.7.7 | Gene3D:1.10.150.20 | MapMan:14.2.5 | Gene3D:3.30.1490.100 | Gene3D:3.30.70.270 |
| InterPro:DNA_pol_Y-fam_lit_finger_sf | InterPro:DNA_pol_Y-fam_little_finger | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003684 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr10G08960_001 | EnsemblPlants:GSMUA_Achr10P08960_001 | EnsemblPlants:GSMUA_Achr10T08960_001 | InterPro:IPR001126 |
| InterPro:IPR036775 | UniProt:M0RGM2 | PFAM:PF00817 | PFAM:PF11799 | PFscan:PS50173 | PANTHER:PTHR11076 |
| PANTHER:PTHR11076:SF12 | SUPFAM:SSF100879 | SUPFAM:SSF56672 | UniParc:UPI000294FE6C | InterPro:UmuC | SEG:seg |
Description
REV1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G08960_001]
Coordinates
chr10:+:18974522..18989059
Molecular Weight (calculated)
78430.0 Da
IEP (calculated)
6.749
GRAVY (calculated)
-0.312
Length
707 amino acids
Sequence
(BLAST)
(BLAST)
001: MFDGKMQALS CDEAFLDVTG CDDDPEEIAS MIRKEIEDTT RCTASAGIAG NLLLAYLATR SAKPNGQRFI PSEKVEDYLK DLPVMALPGI GYATYEKLKS
101: RQIQTCGQMY MIPKEALQKD FGIRIGDMLW NYCRGIDNRT VEVVQERKSV GAEVNWGIRF NNLTDCHHFL VNLCKEVSLR LQGCGLQGRA ITLKVKKRKK
201: GAAKPLKFMG CGDCESVSRS ITVPVATDNV VALQRIAKQI FASFHVDVKE VRGIGLHMTK LESSDISRKG HVDNALESWL SSSTVDTGKK SEQITCADKQ
301: CDNGGLPLPN GEPQSRCIYG SNQQDLGKSK SLCDSDTGYN CLPDKDARCC RSYEMRASAL PRLCDLDIDV VKDLPRDIVL EMDDIYEGEL SDLIRKSEKK
401: GSRSSSCSSS VSLPNEDTNV IDGYIASGHV DSPELDLGAK DKGKLPVRET LNPKTVDPCR SKNPNKKAQV SVLENVKSVE RTCLKIQSHN SCSRLNELHI
501: TSTMGPQQLM PASLSQADAS VLEQLPEDVK ADICGFLPVH RKIKVCKDVP FGFDVPNSVK HSSPWYTKSY LWLGSPPFWV EKFKISNSYF LNAIAMLYAE
601: SGKDILLSSI LQSITPLLSS VSESSCEEYD EALHSLHEVI SQYIVLKIGS DVEELYNCFC FLKRFSTVSK LLLRVYNSTL PLFQASMSEI YGGKLRLSVI
701: REKPGEE
101: RQIQTCGQMY MIPKEALQKD FGIRIGDMLW NYCRGIDNRT VEVVQERKSV GAEVNWGIRF NNLTDCHHFL VNLCKEVSLR LQGCGLQGRA ITLKVKKRKK
201: GAAKPLKFMG CGDCESVSRS ITVPVATDNV VALQRIAKQI FASFHVDVKE VRGIGLHMTK LESSDISRKG HVDNALESWL SSSTVDTGKK SEQITCADKQ
301: CDNGGLPLPN GEPQSRCIYG SNQQDLGKSK SLCDSDTGYN CLPDKDARCC RSYEMRASAL PRLCDLDIDV VKDLPRDIVL EMDDIYEGEL SDLIRKSEKK
401: GSRSSSCSSS VSLPNEDTNV IDGYIASGHV DSPELDLGAK DKGKLPVRET LNPKTVDPCR SKNPNKKAQV SVLENVKSVE RTCLKIQSHN SCSRLNELHI
501: TSTMGPQQLM PASLSQADAS VLEQLPEDVK ADICGFLPVH RKIKVCKDVP FGFDVPNSVK HSSPWYTKSY LWLGSPPFWV EKFKISNSYF LNAIAMLYAE
601: SGKDILLSSI LQSITPLLSS VSESSCEEYD EALHSLHEVI SQYIVLKIGS DVEELYNCFC FLKRFSTVSK LLLRVYNSTL PLFQASMSEI YGGKLRLSVI
701: REKPGEE
0001: MKRSLGSNSS NNSGSGSNKK SKKNNNPSNQ KTLGAAWGAA SSRSSFRSSP FSDFGSYMEV KNRKLQNQFE TEASAASRGV SGSEKLIFQG VSIFVDGFTI
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P
Arabidopsis Description
REV1DNA repair protein REV1 [Source:UniProtKB/Swiss-Prot;Acc:A3EWL3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.