Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G335900.1 | Wheat | plastid | 96.26 | 96.58 |
| TraesCS7A01G436200.3 | Wheat | plastid | 96.26 | 96.5 |
| HORVU7Hr1G099700.8 | Barley | cytosol, mitochondrion, nucleus, plastid | 87.91 | 88.06 |
| Os06t0691000-01 | Rice | plastid | 70.55 | 73.69 |
| KXG20701 | Sorghum | plastid | 68.09 | 71.05 |
| Zm00001d014568_P023 | Maize | plastid | 67.49 | 70.24 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 18.3 | 47.57 |
| CDY39397 | Canola | plastid | 39.23 | 43.61 |
| CDY60654 | Canola | plastid | 38.89 | 43.24 |
| AT5G44750.2 | Thale cress | plastid | 40.43 | 42.99 |
| VIT_03s0091g00200.t01 | Wine grape | plastid | 42.72 | 42.72 |
| Solyc01g107510.2.1 | Tomato | nucleus | 37.62 | 42.3 |
| KRH77949 | Soybean | plastid | 40.0 | 42.15 |
| Bra025106.1-P | Field mustard | plastid | 38.98 | 41.49 |
| GSMUA_Achr10P... | Banana | nucleus | 24.94 | 41.44 |
| TraesCS3D01G294800.3 | Wheat | nucleus | 10.21 | 19.08 |
Protein Annotations
| KEGG:00230+2.7.7.7 | KEGG:00240+2.7.7.7 | Gene3D:1.10.150.20 | MapMan:14.2.5 | Gene3D:2.30.40.20 | Gene3D:3.30.1490.100 |
| Gene3D:3.30.70.270 | Gene3D:3.40.50.10190 | InterPro:BRCT_dom | InterPro:BRCT_dom_sf | InterPro:DNA_pol_Y-fam_lit_finger_sf | InterPro:DNA_pol_Y-fam_little_finger |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003684 | GO:GO:0003824 | GO:GO:0003887 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006950 | GO:GO:0006974 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010224 |
| GO:GO:0016740 | GO:GO:0016779 | GO:GO:0042276 | InterPro:IPR001126 | InterPro:IPR001357 | InterPro:IPR036420 |
| InterPro:IPR036775 | PFAM:PF00817 | PFAM:PF11799 | PFAM:PF16589 | PIRSF:PIRSF036573 | PFscan:PS50172 |
| PFscan:PS50173 | PANTHER:PTHR11076 | PANTHER:PTHR11076:SF12 | InterPro:REV1 | SMART:SM00292 | SUPFAM:SSF100879 |
| SUPFAM:SSF52113 | SUPFAM:SSF56672 | EnsemblPlantsGene:TraesCS7D01G426800 | EnsemblPlants:TraesCS7D01G426800.1 | InterPro:UmuC | TIGR:cd00027 |
| TIGR:cd01701 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:548055495..548064654
Molecular Weight (calculated)
129113.0 Da
IEP (calculated)
6.465
GRAVY (calculated)
-0.475
Length
1175 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSTSSGRRSS PPARPEASSS GQKRARGDDD PGTSLVSNPD SASASAPAPA QNPRRGFASS PFADFGSYMS AKNSKLSAQF DADASTSAAP GALFAGVSIF
0101: IDGFTVPSSQ ELKEIMLNNG GRFVNYFSRH TVTHIICTHL PESKMRNMRA FSKGLPVVKP GWVVDSLAEN RLLSWVPYQI SQHNSSSRKQ MKLSAFFSGK
0201: QNGIRYQSNQ NDENKDLEFQ TSSAQEGSRD QTESCEQEGP LLNVEVAEDS LSSDEHRVPL MNVEVAEDSL SSDEHEVPLM NVEVAEDSLS SDEHGVSTFE
0301: ERDGEDFAVD EDDNACKIAF SESMDNDMDP KLHVAQSPDA TSRCSDVCGT GSVGSHLSIG SLEKDTAKSS SRSHSTLTDP NFVENYFKHS RLHFIGTWRN
0401: RYRKRFSNLP GAKSSKGNND HSGKKKTIIH IDMDCFFVSV VIRNRPELHD KPVAVCHSDN PKGTAEISSA NYPARNYGIK AGMFVRDAKA RCPHLTVVPY
0501: NFDAYGEVAD QFYGILHKYC TKVQALSCDE AFLDMTECLH DNPEEVTERM RNEIFGTTKC TASAGIAENR LLARLATRSA KPNGQLFISS EKVDDYLSTL
0601: PIKALPGIGY TVSDKLKSKE VEHCGQLRNI SKDALHKDFG KKISNMLWNY CRGIDHSVVE AVQETKSVGA EVNWGVRFNE NKDADNFLVN LSREVSLRLQ
0701: GCGLQGRTIT LKVKTRRKGA GEPLKFMGCG DCETMSRSTT MTGATDNLVT LQRIARQLFA ALHVDVKEVR GVGLKMSKLE HADLGRGAQQ GNMLKSWLGS
0801: SSEKLKKQCS ERTCFLGNSD GAGATTSEVR NLGSSRPSLT GVASHLSKVK LTSGRSTRVH AAELPPLSEL DLEVLKNLPP EIISEMNDMY KGELHGFLGT
0901: IKGDEGKESN SKSCVLPAVN QNSVPVCNAR LHQYGERTDS MHLEKRNNIK GASDQEVQTA HASCSRANEL IDTESVTRLD FMPNSLSQAD FTVLQELPED
1001: VRADLFNVIP LHRPIDPTCC TSNVTENKSL KNGGTDDPKN PVICVLPGSS QKWAEQFRVS SSLLLNAIAE QHANSISSQP LSSILEHVAS LLPLCPTSGS
1101: EEWSDTLSRL SVLLTEYIHL KVDSDIEELY KCFLLLKRFS SASELFLELH NSILPLLQYG WPSSPLLYHL WLSQT
0101: IDGFTVPSSQ ELKEIMLNNG GRFVNYFSRH TVTHIICTHL PESKMRNMRA FSKGLPVVKP GWVVDSLAEN RLLSWVPYQI SQHNSSSRKQ MKLSAFFSGK
0201: QNGIRYQSNQ NDENKDLEFQ TSSAQEGSRD QTESCEQEGP LLNVEVAEDS LSSDEHRVPL MNVEVAEDSL SSDEHEVPLM NVEVAEDSLS SDEHGVSTFE
0301: ERDGEDFAVD EDDNACKIAF SESMDNDMDP KLHVAQSPDA TSRCSDVCGT GSVGSHLSIG SLEKDTAKSS SRSHSTLTDP NFVENYFKHS RLHFIGTWRN
0401: RYRKRFSNLP GAKSSKGNND HSGKKKTIIH IDMDCFFVSV VIRNRPELHD KPVAVCHSDN PKGTAEISSA NYPARNYGIK AGMFVRDAKA RCPHLTVVPY
0501: NFDAYGEVAD QFYGILHKYC TKVQALSCDE AFLDMTECLH DNPEEVTERM RNEIFGTTKC TASAGIAENR LLARLATRSA KPNGQLFISS EKVDDYLSTL
0601: PIKALPGIGY TVSDKLKSKE VEHCGQLRNI SKDALHKDFG KKISNMLWNY CRGIDHSVVE AVQETKSVGA EVNWGVRFNE NKDADNFLVN LSREVSLRLQ
0701: GCGLQGRTIT LKVKTRRKGA GEPLKFMGCG DCETMSRSTT MTGATDNLVT LQRIARQLFA ALHVDVKEVR GVGLKMSKLE HADLGRGAQQ GNMLKSWLGS
0801: SSEKLKKQCS ERTCFLGNSD GAGATTSEVR NLGSSRPSLT GVASHLSKVK LTSGRSTRVH AAELPPLSEL DLEVLKNLPP EIISEMNDMY KGELHGFLGT
0901: IKGDEGKESN SKSCVLPAVN QNSVPVCNAR LHQYGERTDS MHLEKRNNIK GASDQEVQTA HASCSRANEL IDTESVTRLD FMPNSLSQAD FTVLQELPED
1001: VRADLFNVIP LHRPIDPTCC TSNVTENKSL KNGGTDDPKN PVICVLPGSS QKWAEQFRVS SSLLLNAIAE QHANSISSQP LSSILEHVAS LLPLCPTSGS
1101: EEWSDTLSRL SVLLTEYIHL KVDSDIEELY KCFLLLKRFS SASELFLELH NSILPLLQYG WPSSPLLYHL WLSQT
0001: MKRSLGSNSS NNSGSGSNKK SKKNNNPSNQ KTLGAAWGAA SSRSSFRSSP FSDFGSYMEV KNRKLQNQFE TEASAASRGV SGSEKLIFQG VSIFVDGFTI
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P
Arabidopsis Description
REV1DNA repair protein REV1 [Source:UniProtKB/Swiss-Prot;Acc:A3EWL3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.