CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0091g00200.t01	Wine grape	plastid	57.4	54.47
CDY39397	Canola	plastid	49.42	52.13
CDY60654	Canola	plastid	48.79	51.47
Solyc01g107510.2.1	Tomato	nucleus	47.35	50.53
AT5G44750.2	Thale cress	plastid	49.96	50.41
Bra025106.1-P	Field mustard	plastid	49.06	49.55
GSMUA_Achr10P...	Banana	nucleus, plastid	19.28	47.57
KXG20701	Sorghum	plastid	43.14	42.72
Zm00001d014568_P023	Maize	plastid	43.05	42.52
Os06t0691000-01	Rice	plastid	42.33	41.96
TraesCS7A01G436200.3	Wheat	plastid	42.6	40.53
TraesCS7B01G335900.1	Wheat	plastid	42.24	40.22
TraesCS7D01G426800.1	Wheat	plastid	42.15	40.0
HORVU7Hr1G099700.8	Barley	cytosol, mitochondrion, nucleus, plastid	40.99	38.96
GSMUA_Achr10P...	Banana	nucleus	24.57	38.76
KRH27580	Soybean	nucleus	11.66	19.17
KRH77930	Soybean	cytosol	10.76	19.11
KRH42423	Soybean	nucleus	11.12	17.64

Protein Annotations

KEGG:00230+2.7.7.7	KEGG:00240+2.7.7.7	Gene3D:1.10.150.20	EntrezGene:100778409	MapMan:14.2.5	Gene3D:2.30.40.20
Gene3D:3.30.1490.100	Gene3D:3.30.70.270	Gene3D:3.40.50.10190	EMBL:ACUP02000686	InterPro:BRCT_dom	InterPro:BRCT_dom_sf
InterPro:DNA_pol_Y-fam_lit_finger_sf	InterPro:DNA_pol_Y-fam_little_finger	EnsemblPlantsGene:GLYMA_01G243900	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003684	GO:GO:0003824	GO:GO:0003887	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006281	GO:GO:0006950
GO:GO:0006974	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009987
GO:GO:0010224	GO:GO:0016740	GO:GO:0016779	GO:GO:0042276	GO:GO:0071897	UniProt:I1JB00
InterPro:IPR001126	InterPro:IPR001357	InterPro:IPR036420	InterPro:IPR036775	EnsemblPlants:KRH77949	ProteinID:KRH77949
ProteinID:KRH77949.1	PFAM:PF00817	PFAM:PF11799	PFAM:PF16589	PIRSF:PIRSF036573	PFscan:PS50172
PFscan:PS50173	PANTHER:PTHR11076	PANTHER:PTHR11076:SF12	InterPro:REV1	SMART:SM00292	SUPFAM:SSF100879
SUPFAM:SSF52113	SUPFAM:SSF56672	UniParc:UPI0002336EB8	InterPro:UmuC	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:56647617..56660256

Molecular Weight (calculated)

124182.0 Da

IEP (calculated)

7.493

GRAVY (calculated)

-0.444

Length

1115 amino acids

Sequence
(BLAST)

0001: MSLDSSRSGN SKRSFSNSIS SNDYIKKKKK KKTTPNQKTL GAAWGSKSNS RKPAFSDFAS YMTEKNRKLH NQFEAQASTS SLTLSASLFS GVSIFVDGFT
0101: IPSNQELRSY MLKYGGRFEN YFSRHRVTHI ICSNLPDSKV KNLRAFSAGL PVVKPTWILD SVAANRLLSW VPYQLDQLAN NQPKLSAFFT LKSSKMSEDA
0201: YTNDLCQVVS DIEDSSMRVG RSDSEDRHSS KVGDMSELSG QISTESDDTI PENTNAIMME ELTSVREHAG GSNAATKDER NVKGELEPAH QAPSTSFSTP
0301: CSDELNVKEY PNSSGTKPSK QCHSTLADPN FVENYFKSSR LHFIGTWRNR YRKRFPTLST GFNNESANNS ASDISHNSVI IHVDMDCFFV SVVIRNHPEL
0401: LGQPVAVCHS NNSNGTAEIS SANYPARSHG IRAGMFVRDA KALCPHLVIF PYNFEAYEEV ADQFYSILHQ RCKKVQAVSC DEAFLDATDS EVEDPELLAS
0501: SIREEIYKTT GCTASAGIAG NMLMARIATR TAKPNGQYHI TTEKVEDHLC QLPINALPGI GYVLQEKLKK QNVHTCGQLR MISKASLQKD YGMKTGEMLW
0601: IYSRGIDNRL VGGFQESKSV GADVNWGVRF KDIKDCEHFL INLCKEVSLR LQGCGVQGRT FTLKIKKRRK NADEPAKFMG CGDCENLSHS VTIPVATDNV
0701: EILQRIVKQL LGCFYIDVKE IRGIGLHVSR LESAEASKQG TVKYTLKSWL TSGYASIENQ KYPMGHDKQN RDSTCSRACR DLPGSSVEMD NKIPNNQAST
0801: NPISTPPPLC NLDVEVIRNL PPEVFSELNE IYGGKLIDYI ANSKSTSENS SPSGNSFLEQ AIKKEEELSY SKPVPQNNPL SKNKAKQNEA GTGEGEAVPY
0901: SVCGPYFKVT HHSSFEKDDL LPSSFSQVDG SVFQQLPEDL KAVIVEQLPA HRRAEICSNV VVAPPLENHS LSVGIEISEN FPGSSYHDNL WAGNPPNWVG
1001: KFKVSSCLML KKLAEMYYKS GLTSTLSLVL HQIISEFYEL NLAQQFSDET VNIMCELLRQ YIKVKIERDI EEIYICFRLL KRFAAKSQFF LQVYNSVCPY
1101: LQATVDDNYG GTLLL

Best Arabidopsis Sequence Match ( AT5G44750.1 )
(BLAST)

0001: MKRSLGSNSS NNSGSGSNKK SKKNNNPSNQ KTLGAAWGAA SSRSSFRSSP FSDFGSYMEV KNRKLQNQFE TEASAASRGV SGSEKLIFQG VSIFVDGFTI
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P

Arabidopsis Description

REV1DNA repair protein REV1 [Source:UniProtKB/Swiss-Prot;Acc:A3EWL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.