Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G335900.1 | Wheat | plastid | 88.06 | 88.22 |
| TraesCS7A01G436200.3 | Wheat | plastid | 87.89 | 87.97 |
| TraesCS7D01G426800.1 | Wheat | plastid | 88.06 | 87.91 |
| Os06t0691000-01 | Rice | plastid | 67.6 | 70.49 |
| KXG20701 | Sorghum | plastid | 64.54 | 67.23 |
| Zm00001d014568_P023 | Maize | plastid | 64.02 | 66.52 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 18.07 | 46.9 |
| CDY39397 | Canola | plastid | 38.79 | 43.05 |
| CDY60654 | Canola | plastid | 38.53 | 42.76 |
| Solyc01g107510.2.1 | Tomato | nucleus | 37.6 | 42.2 |
| AT5G44750.2 | Thale cress | plastid | 39.73 | 42.17 |
| VIT_03s0091g00200.t01 | Wine grape | plastid | 41.43 | 41.36 |
| Bra025106.1-P | Field mustard | plastid | 38.7 | 41.12 |
| KRH77949 | Soybean | plastid | 38.96 | 40.99 |
| GSMUA_Achr10P... | Banana | nucleus | 24.47 | 40.59 |
| HORVU4Hr1G013680.2 | Barley | nucleus | 10.4 | 18.63 |
| HORVU3Hr1G072920.6 | Barley | cytosol, nucleus | 10.23 | 18.46 |
Protein Annotations
| KEGG:00230+2.7.7.7 | KEGG:00240+2.7.7.7 | Gene3D:1.10.150.20 | MapMan:14.2.5 | Gene3D:2.30.40.20 | Gene3D:3.30.1490.100 |
| Gene3D:3.30.70.270 | Gene3D:3.40.50.10190 | UniProt:A0A287XJM9 | InterPro:BRCT_dom | InterPro:BRCT_dom_sf | InterPro:DNA_pol_Y-fam_lit_finger_sf |
| InterPro:DNA_pol_Y-fam_little_finger | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003684 | GO:GO:0003824 |
| GO:GO:0003887 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006950 | GO:GO:0006974 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010224 | GO:GO:0016740 |
| GO:GO:0016779 | GO:GO:0042276 | GO:GO:0071897 | EnsemblPlantsGene:HORVU7Hr1G099700 | EnsemblPlants:HORVU7Hr1G099700.8 | InterPro:IPR001126 |
| InterPro:IPR001357 | InterPro:IPR036420 | InterPro:IPR036775 | PFAM:PF00817 | PFAM:PF11799 | PFAM:PF16589 |
| PIRSF:PIRSF036573 | PFscan:PS50172 | PFscan:PS50173 | PANTHER:PTHR11076 | PANTHER:PTHR11076:SF12 | InterPro:REV1 |
| SMART:SM00292 | SUPFAM:SSF100879 | SUPFAM:SSF52113 | SUPFAM:SSF56672 | UniParc:UPI000B4831D9 | InterPro:UmuC |
| SEG:seg | : | : | : | : | : |
Description
DNA repair protein REV1 [Source:UniProtKB/TrEMBL;Acc:A0A287XJM9]
Coordinates
chrchr7H:+:602174340..602194166
Molecular Weight (calculated)
129662.0 Da
IEP (calculated)
6.799
GRAVY (calculated)
-0.452
Length
1173 amino acids
Sequence
(BLAST)
(BLAST)
0001: PAPAPAQNPR RAFASSPFAD FGSYMSAKNS KLSAQFDADA STSAAAAPGA LFAGVSIFVD GFTVPSSQEL KEIMLNNGGR FVNYFSRHTV THIICTHLPE
0101: SKMRNMRAFS KGLPVVKPGW VVDSLAENRL LSWVPYQISQ HNSSSRKQMK LSAFFSGKQN GIQYQGNQND ENKDPEFQTS SGQEGSRDQT ESCEQEGPLL
0201: NVEVAEDSLS SDEHGVPVMN MEVAEDSLSS DEHGVPLMNV EVAEDSLSSD EHGVSTFEKR DGEDIAVDED DNACQIAFSE SMDNDMDAEL HVAQSPDATS
0301: RCSDVCGTGS VGSHLPIGSL EKDTAKSSSR SHSTLTDPNF VENYFKHSRL HFIGTWRNRY RKRFSNLPGA KSSKGNNDHS GTKKTIIHID MDCFFVSVVI
0401: RNRPELQDKP VAVCHSDNPK GTAEISSANY PARNYGIKAG MFVRDAKARC PHLTVVPYNF DAYGEVADQF YGILHKYCTK VQALSCDEAF LDMTECSHDN
0501: PEEVTERMRN EIFGTTKCTA SAGIAENRLL ARLATRSAKP NGQLFISSEK VDDYLSTLPV KALPGIGYTV SDKLKSKEVE HCGQLRNISK DALHKDFGKK
0601: ISNMLWNYCR GIDHSVVEFV QETKSVGAEV NWGVRFNENK DADNFLVNLS KEVSLRLQGC GLQGRTITLK VLWADSTCFS PFLASWSNRQ RFITICSALK
0701: VKTRRKGAGE PLKFMGCGDC ETMSRSTTIT GATDNLVTLQ RIARQLFAAL HVDVKEVRGV GLKMSKLEHA DLVRGAPQGN MLKSWLGSSS EKLKKQGSER
0801: TCFLGNSDDA GTSEVRNLGS SRPLFTGVKS QSSKVNLTSG RSTRVHAVEL PPLSELDLEV LKNLPPEIIS EMNDMYKGEL HGFLGRRNNN EGKESNSKSR
0901: VLPAVNQNSV PVSNARLPQY GERTDSMHLE RWNNIKGPSD EEVQTAHASC SRANELIDTE SVTRLDFMPN SLSQADFTVL QELPEDVKAD LFNVLPLHRS
1001: IDPTRHISNA TENKSLKNGG TDDPKNPVIC VLPGNSEKWV EQFRVSSSLL LKAIAQQHAN SISCQPLSSI LEHAASLLPL CPTLGGEEWN DTLSRLSVLL
1101: TEYIHLKVDS DIEELYKCFL LLKRCSRQHL SFFWNCTIAF FLYCRIPSLN IMVGHCVSSL KPRYRGPFGD RKG
0101: SKMRNMRAFS KGLPVVKPGW VVDSLAENRL LSWVPYQISQ HNSSSRKQMK LSAFFSGKQN GIQYQGNQND ENKDPEFQTS SGQEGSRDQT ESCEQEGPLL
0201: NVEVAEDSLS SDEHGVPVMN MEVAEDSLSS DEHGVPLMNV EVAEDSLSSD EHGVSTFEKR DGEDIAVDED DNACQIAFSE SMDNDMDAEL HVAQSPDATS
0301: RCSDVCGTGS VGSHLPIGSL EKDTAKSSSR SHSTLTDPNF VENYFKHSRL HFIGTWRNRY RKRFSNLPGA KSSKGNNDHS GTKKTIIHID MDCFFVSVVI
0401: RNRPELQDKP VAVCHSDNPK GTAEISSANY PARNYGIKAG MFVRDAKARC PHLTVVPYNF DAYGEVADQF YGILHKYCTK VQALSCDEAF LDMTECSHDN
0501: PEEVTERMRN EIFGTTKCTA SAGIAENRLL ARLATRSAKP NGQLFISSEK VDDYLSTLPV KALPGIGYTV SDKLKSKEVE HCGQLRNISK DALHKDFGKK
0601: ISNMLWNYCR GIDHSVVEFV QETKSVGAEV NWGVRFNENK DADNFLVNLS KEVSLRLQGC GLQGRTITLK VLWADSTCFS PFLASWSNRQ RFITICSALK
0701: VKTRRKGAGE PLKFMGCGDC ETMSRSTTIT GATDNLVTLQ RIARQLFAAL HVDVKEVRGV GLKMSKLEHA DLVRGAPQGN MLKSWLGSSS EKLKKQGSER
0801: TCFLGNSDDA GTSEVRNLGS SRPLFTGVKS QSSKVNLTSG RSTRVHAVEL PPLSELDLEV LKNLPPEIIS EMNDMYKGEL HGFLGRRNNN EGKESNSKSR
0901: VLPAVNQNSV PVSNARLPQY GERTDSMHLE RWNNIKGPSD EEVQTAHASC SRANELIDTE SVTRLDFMPN SLSQADFTVL QELPEDVKAD LFNVLPLHRS
1001: IDPTRHISNA TENKSLKNGG TDDPKNPVIC VLPGNSEKWV EQFRVSSSLL LKAIAQQHAN SISCQPLSSI LEHAASLLPL CPTLGGEEWN DTLSRLSVLL
1101: TEYIHLKVDS DIEELYKCFL LLKRCSRQHL SFFWNCTIAF FLYCRIPSLN IMVGHCVSSL KPRYRGPFGD RKG
0001: MKRSLGSNSS NNSGSGSNKK SKKNNNPSNQ KTLGAAWGAA SSRSSFRSSP FSDFGSYMEV KNRKLQNQFE TEASAASRGV SGSEKLIFQG VSIFVDGFTI
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P
Arabidopsis Description
REV1DNA repair protein REV1 [Source:UniProtKB/Swiss-Prot;Acc:A3EWL3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.