Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
- plastid 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG20701 | Sorghum | plastid | 73.33 | 73.27 |
| Zm00001d014568_P023 | Maize | plastid | 71.82 | 71.57 |
| TraesCS7A01G436200.3 | Wheat | plastid | 74.13 | 71.16 |
| TraesCS7B01G335900.1 | Wheat | plastid | 73.69 | 70.79 |
| TraesCS7D01G426800.1 | Wheat | plastid | 73.69 | 70.55 |
| HORVU7Hr1G099700.8 | Barley | cytosol, mitochondrion, nucleus, plastid | 70.49 | 67.6 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 19.11 | 47.57 |
| CDY39397 | Canola | plastid | 42.04 | 44.75 |
| CDY60654 | Canola | plastid | 41.6 | 44.28 |
| VIT_03s0091g00200.t01 | Wine grape | plastid | 45.24 | 43.32 |
| AT5G44750.2 | Thale cress | plastid | 42.49 | 43.26 |
| Solyc01g107510.2.1 | Tomato | nucleus | 39.47 | 42.49 |
| Bra025106.1-P | Field mustard | plastid | 41.69 | 42.48 |
| KRH77949 | Soybean | plastid | 41.96 | 42.33 |
| GSMUA_Achr10P... | Banana | nucleus | 25.07 | 39.89 |
| Os01t0757800-01 | Rice | cytosol | 10.76 | 18.85 |
| Os03t0616300-01 | Rice | nucleus | 9.87 | 17.99 |
Protein Annotations
| KEGG:00230+2.7.7.7 | KEGG:00240+2.7.7.7 | Gene3D:1.10.150.20 | MapMan:14.2.5 | Gene3D:2.30.40.20 | Gene3D:3.30.1490.100 |
| Gene3D:3.30.70.270 | Gene3D:3.40.50.10190 | EntrezGene:4341904 | ProteinID:BAD45631.1 | ProteinID:BAD54508.1 | ProteinID:BAF20333.1 |
| ProteinID:BAS99233.1 | ProteinID:BAS99234.1 | InterPro:BRCT_dom | InterPro:BRCT_dom_sf | InterPro:DNA_pol_Y-fam_lit_finger_sf | InterPro:DNA_pol_Y-fam_little_finger |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003684 | GO:GO:0003824 | GO:GO:0003887 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006950 | GO:GO:0006974 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010224 | GO:GO:0016740 | GO:GO:0016779 |
| GO:GO:0042276 | GO:GO:0071897 | InterPro:IPR001126 | InterPro:IPR001357 | InterPro:IPR036420 | InterPro:IPR036775 |
| EnsemblPlantsGene:Os06g0691000 | EnsemblPlants:Os06t0691000-01 | PFAM:PF00817 | PFAM:PF11799 | PFAM:PF16589 | PIRSF:PIRSF036573 |
| PFscan:PS50172 | PFscan:PS50173 | PANTHER:PTHR11076 | PANTHER:PTHR11076:SF12 | UniProt:Q654Y6 | InterPro:REV1 |
| SMART:SM00292 | SUPFAM:SSF100879 | SUPFAM:SSF52113 | SUPFAM:SSF56672 | UniParc:UPI000043A35F | InterPro:UmuC |
| RefSeq:XP_015643387.1 | SEG:seg | : | : | : | : |
Description
Rev1DNA-repair protein, UmuC-like domain containing protein. (Os06t0691000-01);Hypothetical conserved gene. (Os06t0691000-02)
Coordinates
chr6:-:28806781..28816144
Molecular Weight (calculated)
123774.0 Da
IEP (calculated)
6.880
GRAVY (calculated)
-0.524
Length
1125 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSASSSGGRG APPPATAASP GQKRPRGDDP ASPSNRSESA PAKNPRRAFS SSPFADFGSY MAAKNSKLAA QFEADASTSA AEVTGGVFAG VSIFVDGFTV
0101: PSSQELKEIM LNNGGRFVNY FSRNTVTHII CTHLPNSKMS NLRAFSKGLP VVKPAWVVDS LAENRLLSCV PYQISQHNSS SRKQTKLSSF FSGRHYQGEL
0201: NDQSNSHELQ SSSVQEGSQD HNSGCEKEGS LLKEEASKDS LSSDDHKASM FEEQDSEDFV DEAGNAYETA CSERRDNDMD GKLHVAESPD IRSRCSNLCS
0301: TSSTGSHLSL DSLDRNATKS SSRTHSTLTD PNFVENYFKY SRLHFIGTWR NRYRKRFSNL LGDKSSKGNR DHSGKNNTII HIDMDCFFVS VVIRNKPELH
0401: DKPVAVCHSD NPKGTAEISS ANYPARNYGI KAGMFVREAK ARCPHLMIVP YDFDAYGEVA DQFYGILHKY CSKVQALSCD EAFLDMTECL HDNPEEVTQK
0501: IRNEIFGTTK CSASAGISGN MLIARLATRS AKPNGQCFIS SEKVDGYLNT LSIKALPGIG HTVSDKLKSK EVEYCGQLRN IPKESLHKDF GKKIGDMLWN
0601: YCRGIDHSVV EAVQETKSVG AEVNWGVRFN DNKDAENFLV NLSKEVCLRL EGCGVQGRTI TLKLKTRRKG AGEPIKFMGC GDCETVSRSM TIAGATDNPV
0701: TLQRIAKQLF SSFCVDVKEV RGVGLKISRL EHADLARGAP QGNMLESWLA SPSDKLKKHS TEKACLLKNR DDAATSERRG FGSIRPSGIG GTSRSSEVNP
0801: PSDRSTRVGV ELPPLSELDL EVLKNLPPEI IYEMNDMYKG ELHGFLGITS GDKAKESNTK SLVFPAVDQN LVPVLDTKLH GDGKHKDSIH FKKEADIKGP
0901: SGEQLSELKQ ANAPRSIASE LVDIPTKSVI QHDFMPNSLS QADVTVLQEL PEDVKADLFN ALPLHRSGDP TCSTSHVSEN KFPQDGRSDD PKQHPQICHL
1001: PGNSQKWIEE FRVSHCLILN VIAEQHTDSI SSRPLSSVLE PVISYLPLCP NSGTEEWNEA FASLSELLTQ YIHQKVESDI EELHKCFRLL KRLSSGSELF
1101: LELHDSILPL LQDSVRQHYG GILHL
0101: PSSQELKEIM LNNGGRFVNY FSRNTVTHII CTHLPNSKMS NLRAFSKGLP VVKPAWVVDS LAENRLLSCV PYQISQHNSS SRKQTKLSSF FSGRHYQGEL
0201: NDQSNSHELQ SSSVQEGSQD HNSGCEKEGS LLKEEASKDS LSSDDHKASM FEEQDSEDFV DEAGNAYETA CSERRDNDMD GKLHVAESPD IRSRCSNLCS
0301: TSSTGSHLSL DSLDRNATKS SSRTHSTLTD PNFVENYFKY SRLHFIGTWR NRYRKRFSNL LGDKSSKGNR DHSGKNNTII HIDMDCFFVS VVIRNKPELH
0401: DKPVAVCHSD NPKGTAEISS ANYPARNYGI KAGMFVREAK ARCPHLMIVP YDFDAYGEVA DQFYGILHKY CSKVQALSCD EAFLDMTECL HDNPEEVTQK
0501: IRNEIFGTTK CSASAGISGN MLIARLATRS AKPNGQCFIS SEKVDGYLNT LSIKALPGIG HTVSDKLKSK EVEYCGQLRN IPKESLHKDF GKKIGDMLWN
0601: YCRGIDHSVV EAVQETKSVG AEVNWGVRFN DNKDAENFLV NLSKEVCLRL EGCGVQGRTI TLKLKTRRKG AGEPIKFMGC GDCETVSRSM TIAGATDNPV
0701: TLQRIAKQLF SSFCVDVKEV RGVGLKISRL EHADLARGAP QGNMLESWLA SPSDKLKKHS TEKACLLKNR DDAATSERRG FGSIRPSGIG GTSRSSEVNP
0801: PSDRSTRVGV ELPPLSELDL EVLKNLPPEI IYEMNDMYKG ELHGFLGITS GDKAKESNTK SLVFPAVDQN LVPVLDTKLH GDGKHKDSIH FKKEADIKGP
0901: SGEQLSELKQ ANAPRSIASE LVDIPTKSVI QHDFMPNSLS QADVTVLQEL PEDVKADLFN ALPLHRSGDP TCSTSHVSEN KFPQDGRSDD PKQHPQICHL
1001: PGNSQKWIEE FRVSHCLILN VIAEQHTDSI SSRPLSSVLE PVISYLPLCP NSGTEEWNEA FASLSELLTQ YIHQKVESDI EELHKCFRLL KRLSSGSELF
1101: LELHDSILPL LQDSVRQHYG GILHL
0001: MKRSLGSNSS NNSGSGSNKK SKKNNNPSNQ KTLGAAWGAA SSRSSFRSSP FSDFGSYMEV KNRKLQNQFE TEASAASRGV SGSEKLIFQG VSIFVDGFTI
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P
Arabidopsis Description
REV1DNA repair protein REV1 [Source:UniProtKB/Swiss-Prot;Acc:A3EWL3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.