Factsheet for Bra025106.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39397	Canola	plastid	93.39	97.54
AT5G44750.2	Thale cress	plastid	80.07	80.0
KRH77949	Soybean	plastid	49.55	49.06
Solyc01g107510.2.1	Tomato	nucleus	45.11	47.66
VIT_03s0091g00200.t01	Wine grape	plastid	49.91	46.89
GSMUA_Achr10P...	Banana	nucleus, plastid	17.66	43.14
Os06t0691000-01	Rice	plastid	42.48	41.69
KXG20701	Sorghum	plastid	41.76	40.94
Zm00001d014568_P023	Maize	plastid	41.58	40.66
TraesCS7A01G436200.3	Wheat	plastid	41.39	38.99
TraesCS7D01G426800.1	Wheat	plastid	41.49	38.98
TraesCS7B01G335900.1	Wheat	plastid	41.3	38.94
HORVU7Hr1G099700.8	Barley	cytosol, mitochondrion, nucleus, plastid	41.12	38.7
GSMUA_Achr10P...	Banana	nucleus	22.55	35.22
Bra018821.1-P	Field mustard	nucleus	11.5	18.68
Bra025107.1-P	Field mustard	nucleus	10.51	16.79

Protein Annotations

KEGG:00230+2.7.7.7	KEGG:00240+2.7.7.7	Gene3D:1.10.150.20	MapMan:14.2.5	Gene3D:2.30.40.20	Gene3D:3.30.1490.100
Gene3D:3.30.70.270	Gene3D:3.40.50.10190	InterPro:BRCT_dom	InterPro:BRCT_dom_sf	EnsemblPlantsGene:Bra025106	EnsemblPlants:Bra025106.1
EnsemblPlants:Bra025106.1-P	InterPro:DNA_pol_Y-fam_lit_finger_sf	InterPro:DNA_pol_Y-fam_little_finger	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003684	GO:GO:0003824	GO:GO:0003887	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006281	GO:GO:0006950
GO:GO:0006974	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009987
GO:GO:0010224	GO:GO:0016740	GO:GO:0016779	GO:GO:0042276	GO:GO:0071897	InterPro:IPR001126
InterPro:IPR001357	InterPro:IPR036420	InterPro:IPR036775	UniProt:M4E8K0	PFAM:PF00817	PFAM:PF11799
PFAM:PF16589	PIRSF:PIRSF036573	PFscan:PS50172	PFscan:PS50173	PANTHER:PTHR11076	PANTHER:PTHR11076:SF12
InterPro:REV1	SMART:SM00292	SUPFAM:SSF100879	SUPFAM:SSF52113	SUPFAM:SSF56672	UniParc:UPI000253F62C
InterPro:UmuC	SEG:seg	:	:	:	:

Description

AT5G44750 (E=0.0) REV1, ATREV1 | REV1; DNA-directed DNA polymerase

Coordinates

chrA06:-:25189900..25199698

Molecular Weight (calculated)

122640.0 Da

IEP (calculated)

6.810

GRAVY (calculated)

-0.471

Length

1104 amino acids

Sequence
(BLAST)

0001: MKRSIGSNSS GNSGSSKKSK KSNQKTLGAA WGAASSSYRS SPFSNFGSYM EVKNRKLQNQ FETEASSGVS GSEELIFQGV SIFVDGFTIP SHQELRGYML
0101: RYGGRFENYF SRPSVTHIIC SNLPDSKVKN LRAFSRGLPV VKPSWIVDSI SANRLLGWVP YQLDQLNDTQ PKLSAFFAPR RHSNPPVTSS QPETGYSEAE
0201: EGSSIIAGDS EESRDNVVDE IDGVYTEKTT PEMTAQTRTD KLKSSEVNAE TLGNYDKEEK ELTSELQPTS NLPSASDNKS SHGKPVAPAA GSSVRRHSTV
0301: EDPNFVENYF KNSRLHFIGT WRNRYCKRFH GSFNGLKWTD SGQNTAENAN KSTIIHIDLP SGSSCSDTKF VTTNNVKARS YKELYKDSLK NKQDSFFVSV
0401: VIRNRLELQD KPVAVCHSDS PKGTAEISSA NYPARAYGVK AGMFVRHAKD LCPQLVIVPY NFEAYEEVAD QFYDILHRHC RKVQAVSCDE AFLDVSDLRD
0501: VEPEFLASTI RKEILDTTGC SASAGIGGTM LMARLATRVA KPAGQFHISA EKVEEFLDQL AVGTLPGVGS VLKEKLEMQN IQTCRQLRLI SKDSLQKDFG
0601: VKTGEMLWSY SRGLDLRSVT AVQESKSIGA EVNWGVRFRD QQDVQHFLQC LCKEVSLRLQ GCEMIGRTFT LKIKKRKKDA GEPAKYMGCG DCDNFSRSIT
0701: VPAATDDIEV LQRISKKLFG SFNLDVKEVR GVGLQVSKLE GADPSNKGSK TLTSWLNSAP ASIQTEKDDH VFAAEVREIP ADCKRRDTGG VSSLRECNSA
0801: EPSVQSGDTN SSLPPMCHLD MEVLENLPPE LLTELDGTYG GKLFELIEKK RGKRKINSDS SHVSLDEPHV AHPPFARAPN ERAIETNDLM PLSLSQVDVS
0901: VLQELPEELR ADVLGAFPAH PRQQSSSDAP METCKKQDKE TTYINDGENE IGFSSSSLWF GNPPLWVENF KVSGNSTLEK ISEIYCNVAQ SRPMLSTVLQ
1001: RVISEVGSFH DASINDLEKT VDDVWEFLKE YIKIKVEGDI EEIYLCFRLL KRLAARSQLF HQVYEIVSPF IQVHSHSCLT IRRMWILKGI VVNAHEAALT
1101: VVGK

Best Arabidopsis Sequence Match ( AT5G44750.1 )
(BLAST)

0001: MKRSLGSNSS NNSGSGSNKK SKKNNNPSNQ KTLGAAWGAA SSRSSFRSSP FSDFGSYMEV KNRKLQNQFE TEASAASRGV SGSEKLIFQG VSIFVDGFTI
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P

Arabidopsis Description

REV1DNA repair protein REV1 [Source:UniProtKB/Swiss-Prot;Acc:A3EWL3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.