Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 3
  • plastid 4
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY39397 Canola plastid 81.36 85.05
CDY60654 Canola plastid 81.27 84.96
Bra025106.1-P Field mustard plastid 80.0 80.07
KRH77949 Soybean plastid 50.41 49.96
Solyc01g107510.2.1 Tomato nucleus 46.24 48.9
VIT_03s0091g00200.t01 Wine grape plastid 51.31 48.26
GSMUA_Achr10P... Banana nucleus, plastid 18.37 44.91
Os06t0691000-01 Rice plastid 43.26 42.49
KXG20701 Sorghum plastid 42.44 41.65
Zm00001d014568_P023 Maize plastid 42.35 41.45
TraesCS7A01G436200.3 Wheat plastid 42.99 40.53
TraesCS7D01G426800.1 Wheat plastid 42.99 40.43
TraesCS7B01G335900.1 Wheat plastid 42.81 40.39
HORVU7Hr1G099700.8 Barley cytosol, mitochondrion, nucleus, plastid 42.17 39.73
GSMUA_Achr10P... Banana nucleus 23.08 36.07
AT1G49980.1 Thale cress nucleus 10.95 18.03
AT5G44740.2 Thale cress nucleus 10.59 17.41
Protein Annotations
KEGG:00230+2.7.7.7KEGG:00240+2.7.7.7Gene3D:1.10.150.20MapMan:14.2.5Gene3D:2.30.40.20Gene3D:3.30.1490.100
Gene3D:3.30.70.270Gene3D:3.40.50.10190EntrezGene:834504UniProt:A3EWL3ProteinID:AAC79145.1EMBL:AB187523
ProteinID:AED95156.1ProteinID:AED95157.1ArrayExpress:AT5G44750EnsemblPlantsGene:AT5G44750RefSeq:AT5G44750TAIR:AT5G44750
RefSeq:AT5G44750-TAIR-GEnsemblPlants:AT5G44750.2TAIR:AT5G44750.2EMBL:AY080825Unigene:At.30056ProteinID:BAB08828.1
InterPro:BRCT_domInterPro:BRCT_dom_sfInterPro:DNA_pol_Y-fam_lit_finger_sfInterPro:DNA_pol_Y-fam_little_fingerEMBL:EF016093EMBL:EF016094
EMBL:EF016095EMBL:EF016096EMBL:EF016097EMBL:EF016098GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003684GO:GO:0003824GO:GO:0003887GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006259GO:GO:0006281
GO:GO:0006950GO:GO:0006974GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009628
GO:GO:0009987GO:GO:0010224GO:GO:0016740GO:GO:0016779GO:GO:0042276GO:GO:0046872
GO:GO:0071897InterPro:IPR001126InterPro:IPR001357InterPro:IPR036420InterPro:IPR036775RefSeq:NP_001119373.1
RefSeq:NP_199288.4PFAM:PF00817PFAM:PF11799PFAM:PF16589PIRSF:PIRSF036573PO:PO:0000013
PO:PO:0000037PO:PO:0000084PO:PO:0000230PO:PO:0000293PO:PO:0001016PO:PO:0001017
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025195PO:PO:0025281PFscan:PS50172PFscan:PS50173PANTHER:PTHR11076
PANTHER:PTHR11076:SF12InterPro:REV1Symbol:REV1SMART:SM00292SUPFAM:SSF100879SUPFAM:SSF52113
SUPFAM:SSF56672UniParc:UPI0000F2319FInterPro:UmuCSEG:seg::
Description
REV1DNA repair protein REV1 [Source:UniProtKB/Swiss-Prot;Acc:A3EWL3]
Coordinates
chr5:+:18052607..18060169
Molecular Weight (calculated)
122239.0 Da
IEP (calculated)
6.688
GRAVY (calculated)
-0.436
Length
1105 amino acids
Sequence
(BLAST)
0001: MKRSLGSNSS NNSGSGSNKK SKKNNNPSNQ KTLGAAWGAA SSRSSFRSSP FSDFGSYMEV KNRKLQNQFE TEASAASRGV SGSEKLIFQG VSIFVDGFTI
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VFILVQHFLQ CLCKEVSLRL QGCEMIGRTF TLKIKKRKKD AEEPTKYMGC GDCDNLSRSI TVPAATDDIE
0701: VLQRISKKLF GSFCLDVKEV RGVGLQVSKL DSADPSNKGS RTLKSWLSSA PAVVQIEQDD NVFAAKVREN SDCNRPVTGG VSRLRESNSE ESSIQSGDTN
0801: SSLPPMCYLD MEVLENLPPE LLSELDGTYG GKLFELIEKK RGKRRINCNS PHVSLDGTAA SIKELKSLSV KIHGLSTSGE KEYKEPYVPH PSIARTSNQH
0901: TIEMTDLLPS SLSQVDVSVL QELPEELRAD VLGAFPSHRR QQSSSDVPKE TCKKQDEEPI DLKGTENEIG LSFSSLWFGN PPLWTEKFKV SGNCTMEKLS
1001: AIYFKVAQSR PMLSLVLQHA ISEMSSFPDA ASASDLDKAI YDVCELLKQY INLKVGGDIE EIYLCFRLLK RLAARSQLFL QVYEILSPFI QASISEHYGG
1101: SLSIP
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.