Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G335900.1 | Wheat | plastid | 96.76 | 96.84 |
| TraesCS7D01G426800.1 | Wheat | plastid | 96.5 | 96.26 |
| HORVU7Hr1G099700.8 | Barley | cytosol, mitochondrion, nucleus, plastid | 87.97 | 87.89 |
| Os06t0691000-01 | Rice | plastid | 71.16 | 74.13 |
| KXG20701 | Sorghum | plastid | 68.6 | 71.4 |
| Zm00001d014568_P023 | Maize | plastid | 67.75 | 70.33 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 18.17 | 47.12 |
| CDY39397 | Canola | plastid | 39.33 | 43.61 |
| CDY60654 | Canola | plastid | 39.16 | 43.42 |
| AT5G44750.2 | Thale cress | plastid | 40.53 | 42.99 |
| VIT_03s0091g00200.t01 | Wine grape | plastid | 43.0 | 42.89 |
| KRH77949 | Soybean | plastid | 40.53 | 42.6 |
| Solyc01g107510.2.1 | Tomato | nucleus | 37.88 | 42.49 |
| GSMUA_Achr10P... | Banana | nucleus | 25.09 | 41.58 |
| Bra025106.1-P | Field mustard | plastid | 38.99 | 41.39 |
| TraesCS3A01G294700.3 | Wheat | nucleus | 10.58 | 19.78 |
| TraesCS4A01G234800.1 | Wheat | nucleus | 10.75 | 19.27 |
Protein Annotations
| KEGG:00230+2.7.7.7 | KEGG:00240+2.7.7.7 | Gene3D:1.10.150.20 | MapMan:14.2.5 | Gene3D:2.30.40.20 | Gene3D:3.30.1490.100 |
| Gene3D:3.30.70.270 | Gene3D:3.40.50.10190 | InterPro:BRCT_dom | InterPro:BRCT_dom_sf | InterPro:DNA_pol_Y-fam_lit_finger_sf | InterPro:DNA_pol_Y-fam_little_finger |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003684 | GO:GO:0003824 | GO:GO:0003887 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006950 | GO:GO:0006974 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010224 |
| GO:GO:0016740 | GO:GO:0016779 | GO:GO:0042276 | InterPro:IPR001126 | InterPro:IPR001357 | InterPro:IPR036420 |
| InterPro:IPR036775 | PFAM:PF00817 | PFAM:PF11799 | PFAM:PF16589 | PIRSF:PIRSF036573 | PFscan:PS50172 |
| PFscan:PS50173 | PANTHER:PTHR11076 | PANTHER:PTHR11076:SF12 | InterPro:REV1 | SMART:SM00292 | SUPFAM:SSF100879 |
| SUPFAM:SSF52113 | SUPFAM:SSF56672 | EnsemblPlantsGene:TraesCS7A01G436200 | EnsemblPlants:TraesCS7A01G436200.3 | InterPro:UmuC | TIGR:cd00027 |
| TIGR:cd01701 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:630673584..630682706
Molecular Weight (calculated)
128281.0 Da
IEP (calculated)
6.441
GRAVY (calculated)
-0.457
Length
1172 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSSSGRRSS PPARPAASSS GQKRARGDDD PGTSLVSNPA STSASAPAPA QNPRRAFASS PFADFGSYMS AKNSKLSAQF DADASTSAAA PGALFAGVSI
0101: FVDGFTVPSS QELKEIMLNN GGRFVNYFSR HTVTHIICTH LPESKMRNMR AFSKGLPVVK PGWVVDSLAE NRLLSWVPYQ ISQHNSSSRK QMKLSAFFSG
0201: KQNGIQYQGN QNDENKDLEF QTSSAQEGSC DQTESCEQEG PLLNVEVAED SLSSDEHRVP LMNVEVAEDS LSSDEHEVPL MNVEVAEDSL SSDEHGVSTF
0301: EERDGEDFAV AEDDNACKIA FSESMDNDMD PELHVAQSPD ATSRCSDVCG TASVGSHLSI GSLEKDTAKS SSRSHSALTD PNFVENYFKH SRLHFIGTWR
0401: NRYRKRFSNL PGAKSSKGNN DHSGKKKTII HIDMDCFFVS VVIRNRPELH DKPVAVCHSD NPKGTAEISS ANYPARSYGI KAGMFVRDAK ARCPHLTVVP
0501: YNFDAYGEVA DQFYGILHKY CTKVQALSCD EAFLDMTECL HDNPEEVTEI MRNEIFGTTK CTASAGIAEN RLLARLATRS AKPNGQLFIS SEKVDDYLST
0601: LPIKALPGIG YTVSDKLKSK EVEHCGQLRN ISKDALQKDF GKKISNMLWN YCRGIDHSVV EAVQETKSVG AEVNWGVRFN ENKDADNFLV NLSKEVSLRL
0701: QGCGLQGRTI TLKVKTRRKG AGEPLKFMGC GDCETMSRST TMTGATDNLV TLQRIARQLF AALHVDVKEV RGVGLKMSKL EHADLGRGAQ QGNMLKSWLG
0801: SSSEKLKKQC SERTCFLGNS DGAGASTSEI RNLGSSRPSL TGVASHSSKV KLTSGRSTRV HAAELPPLSE LDLEVLKNLP PEIISEMNDM YKGELHGFLG
0901: TIKGDEGKES NSKSRVLPAV NQNSVPVCNA RLHQYGERTD SMHLEKRNNI KGASDQEVQT AHASCSRANE LIDTESVTRL DFMPNSLSQA DFTVLQELPE
1001: DVKADLFNVL PLHRPMDPTC RTSNITENKS LKNGGADDPK NPVICVLAGS SQKWAEQFRV SSSLLLNAIA EQHANSISSQ PLSSILEHVA SLLPLCPTSG
1101: SEEWSDTFSR LSVLLTEYVH LKVDSDIEEL YKCFLLLKRF SSASELFLEL HNSILPLLQD SITQHYGGTL RL
0101: FVDGFTVPSS QELKEIMLNN GGRFVNYFSR HTVTHIICTH LPESKMRNMR AFSKGLPVVK PGWVVDSLAE NRLLSWVPYQ ISQHNSSSRK QMKLSAFFSG
0201: KQNGIQYQGN QNDENKDLEF QTSSAQEGSC DQTESCEQEG PLLNVEVAED SLSSDEHRVP LMNVEVAEDS LSSDEHEVPL MNVEVAEDSL SSDEHGVSTF
0301: EERDGEDFAV AEDDNACKIA FSESMDNDMD PELHVAQSPD ATSRCSDVCG TASVGSHLSI GSLEKDTAKS SSRSHSALTD PNFVENYFKH SRLHFIGTWR
0401: NRYRKRFSNL PGAKSSKGNN DHSGKKKTII HIDMDCFFVS VVIRNRPELH DKPVAVCHSD NPKGTAEISS ANYPARSYGI KAGMFVRDAK ARCPHLTVVP
0501: YNFDAYGEVA DQFYGILHKY CTKVQALSCD EAFLDMTECL HDNPEEVTEI MRNEIFGTTK CTASAGIAEN RLLARLATRS AKPNGQLFIS SEKVDDYLST
0601: LPIKALPGIG YTVSDKLKSK EVEHCGQLRN ISKDALQKDF GKKISNMLWN YCRGIDHSVV EAVQETKSVG AEVNWGVRFN ENKDADNFLV NLSKEVSLRL
0701: QGCGLQGRTI TLKVKTRRKG AGEPLKFMGC GDCETMSRST TMTGATDNLV TLQRIARQLF AALHVDVKEV RGVGLKMSKL EHADLGRGAQ QGNMLKSWLG
0801: SSSEKLKKQC SERTCFLGNS DGAGASTSEI RNLGSSRPSL TGVASHSSKV KLTSGRSTRV HAAELPPLSE LDLEVLKNLP PEIISEMNDM YKGELHGFLG
0901: TIKGDEGKES NSKSRVLPAV NQNSVPVCNA RLHQYGERTD SMHLEKRNNI KGASDQEVQT AHASCSRANE LIDTESVTRL DFMPNSLSQA DFTVLQELPE
1001: DVKADLFNVL PLHRPMDPTC RTSNITENKS LKNGGADDPK NPVICVLAGS SQKWAEQFRV SSSLLLNAIA EQHANSISSQ PLSSILEHVA SLLPLCPTSG
1101: SEEWSDTFSR LSVLLTEYVH LKVDSDIEEL YKCFLLLKRF SSASELFLEL HNSILPLLQD SITQHYGGTL RL
0001: MKRSLGSNSS NNSGSGSNKK SKKNNNPSNQ KTLGAAWGAA SSRSSFRSSP FSDFGSYMEV KNRKLQNQFE TEASAASRGV SGSEKLIFQG VSIFVDGFTI
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P
Arabidopsis Description
REV1DNA repair protein REV1 [Source:UniProtKB/Swiss-Prot;Acc:A3EWL3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.