Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G436200.3 | Wheat | plastid | 96.84 | 96.76 |
| TraesCS7D01G426800.1 | Wheat | plastid | 96.58 | 96.26 |
| HORVU7Hr1G099700.8 | Barley | cytosol, mitochondrion, nucleus, plastid | 88.22 | 88.06 |
| Os06t0691000-01 | Rice | plastid | 70.79 | 73.69 |
| KXG20701 | Sorghum | plastid | 68.66 | 71.4 |
| Zm00001d014568_P023 | Maize | plastid | 67.98 | 70.5 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 18.45 | 47.79 |
| CDY39397 | Canola | plastid | 39.28 | 43.52 |
| CDY60654 | Canola | plastid | 39.11 | 43.33 |
| VIT_03s0091g00200.t01 | Wine grape | plastid | 42.95 | 42.81 |
| AT5G44750.2 | Thale cress | plastid | 40.39 | 42.81 |
| Solyc01g107510.2.1 | Tomato | nucleus | 37.83 | 42.39 |
| KRH77949 | Soybean | plastid | 40.22 | 42.24 |
| GSMUA_Achr10P... | Banana | nucleus | 25.19 | 41.73 |
| Bra025106.1-P | Field mustard | plastid | 38.94 | 41.3 |
| TraesCS3B01G329300.8 | Wheat | nucleus | 10.76 | 19.53 |
| TraesCS4B01G080200.1 | Wheat | nucleus | 10.76 | 19.24 |
| TraesCS7B01G319400.1 | Wheat | cytosol | 4.87 | 12.31 |
Protein Annotations
| KEGG:00230+2.7.7.7 | KEGG:00240+2.7.7.7 | Gene3D:1.10.150.20 | MapMan:14.2.5 | Gene3D:2.30.40.20 | Gene3D:3.30.1490.100 |
| Gene3D:3.30.70.270 | Gene3D:3.40.50.10190 | InterPro:BRCT_dom | InterPro:BRCT_dom_sf | InterPro:DNA_pol_Y-fam_lit_finger_sf | InterPro:DNA_pol_Y-fam_little_finger |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003684 | GO:GO:0003824 | GO:GO:0003887 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006950 | GO:GO:0006974 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010224 |
| GO:GO:0016740 | GO:GO:0016779 | GO:GO:0042276 | InterPro:IPR001126 | InterPro:IPR001357 | InterPro:IPR036420 |
| InterPro:IPR036775 | PFAM:PF00817 | PFAM:PF11799 | PFAM:PF16589 | PIRSF:PIRSF036573 | PFscan:PS50172 |
| PFscan:PS50173 | PANTHER:PTHR11076 | PANTHER:PTHR11076:SF12 | InterPro:REV1 | SMART:SM00292 | SUPFAM:SSF100879 |
| SUPFAM:SSF52113 | SUPFAM:SSF56672 | EnsemblPlantsGene:TraesCS7B01G335900 | EnsemblPlants:TraesCS7B01G335900.1 | InterPro:UmuC | TIGR:cd00027 |
| TIGR:cd01701 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:591045700..591054979
Molecular Weight (calculated)
128417.0 Da
IEP (calculated)
6.442
GRAVY (calculated)
-0.470
Length
1171 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSTSSARRSS PPARPAASSS GQKRARGDDD PGTSLVSNAD PASVPAPAQN PRRAFASSPF ADFGSYMSAK NSKLSAQFDA DASTSAAAAP GALFAGVSIF
0101: VDGFTVPSSQ ELKEIMLNNG GRFVNYFSRH TVTHIVCTHL PESKMRNMRA FSKGLPVVKP GWVVDSLAEN RLLSWVPYQI SQHNSSSRKQ MKLSAFFSGK
0201: QNGIQYQSNQ NDDNKDLEFQ TSSAQEGSRD QTESCEQQGP LLNVEVSEDS LSSDEHRVPL MNVEVAEDSL SSDEHGVPLM NVEVAEDSLS SDEHGVSTFE
0301: ERDGEDFAVD EDDNACKIAF SESMDNDMDP ELHVAQSPDA TSRFSDVCGT GSVGSHLSIG SLEKDTAKSS SRSHSTLTDP NFVENYFKHS RLHFIGTWRN
0401: RYRKRFSNLP GAKSSKGNND HSGKKKTIIH IDMDCFFVSV VIRNRPELHD KPVAVCHSDN PKGTAEISSA NYPARNYGIK AGMFVRDAKA RCPHLTVVPY
0501: NFDAYGEVAD QFYGILHKYC TKVQALSCDE AFLDMTECLH DNPEEVTERM RNEIFGTTKC TASAGIAENR LLARLATRSA KPNGQLFISS EKVDDYLSTL
0601: PIKALPGIGY TVSDKLKSNE VEHCGQLRNI SKDALHKDFG KKISNMLWNY CRGIDHSVVE AVQETKSVGA EVNWGVRFNE NKDADNFLVN LSKEVSLRLQ
0701: GCGLQGRTIT LKVKTRRKGA GEPLKFMGCG DCETMSRSTT MTGATDNLVT LQRIARQLFA ALHVDVKEVR GVGLKMSKLE HADLGRGAQQ GNMLKSWLGS
0801: SSEKLKKQCS ERTCFLGNSD GAGATTSEVR NLGSSRSSLT GVASDLSKVK LTSGRSTRVH AAELPPLSEL DLEVLKNLPP EIISEMNDMY KGELHGFLCT
0901: IKGDEGKESN SKSRVLPAVN QNSVPVCNAR LHQYGERTDS IHLEKRNNIK GASDQEVQTA HASCSRANEL IDTESVTRLD FMPNSLSQAD FTVLQELPED
1001: VKADLFNVLP LHRPIDPTCR TSNVTENKSL KNGGTDDPKN PVICVLPGSS QKWAEQLRVS SSLLLNAIAE QHANSISSQP LSSILEHVAS LLPLCPTPGS
1101: EEWSDTLSRL SVLLTEYIHL KVDSDIEELY KCFLLLKRFS SASELFLELH NSILPLLQDS ITQHYGGTLR L
0101: VDGFTVPSSQ ELKEIMLNNG GRFVNYFSRH TVTHIVCTHL PESKMRNMRA FSKGLPVVKP GWVVDSLAEN RLLSWVPYQI SQHNSSSRKQ MKLSAFFSGK
0201: QNGIQYQSNQ NDDNKDLEFQ TSSAQEGSRD QTESCEQQGP LLNVEVSEDS LSSDEHRVPL MNVEVAEDSL SSDEHGVPLM NVEVAEDSLS SDEHGVSTFE
0301: ERDGEDFAVD EDDNACKIAF SESMDNDMDP ELHVAQSPDA TSRFSDVCGT GSVGSHLSIG SLEKDTAKSS SRSHSTLTDP NFVENYFKHS RLHFIGTWRN
0401: RYRKRFSNLP GAKSSKGNND HSGKKKTIIH IDMDCFFVSV VIRNRPELHD KPVAVCHSDN PKGTAEISSA NYPARNYGIK AGMFVRDAKA RCPHLTVVPY
0501: NFDAYGEVAD QFYGILHKYC TKVQALSCDE AFLDMTECLH DNPEEVTERM RNEIFGTTKC TASAGIAENR LLARLATRSA KPNGQLFISS EKVDDYLSTL
0601: PIKALPGIGY TVSDKLKSNE VEHCGQLRNI SKDALHKDFG KKISNMLWNY CRGIDHSVVE AVQETKSVGA EVNWGVRFNE NKDADNFLVN LSKEVSLRLQ
0701: GCGLQGRTIT LKVKTRRKGA GEPLKFMGCG DCETMSRSTT MTGATDNLVT LQRIARQLFA ALHVDVKEVR GVGLKMSKLE HADLGRGAQQ GNMLKSWLGS
0801: SSEKLKKQCS ERTCFLGNSD GAGATTSEVR NLGSSRSSLT GVASDLSKVK LTSGRSTRVH AAELPPLSEL DLEVLKNLPP EIISEMNDMY KGELHGFLCT
0901: IKGDEGKESN SKSRVLPAVN QNSVPVCNAR LHQYGERTDS IHLEKRNNIK GASDQEVQTA HASCSRANEL IDTESVTRLD FMPNSLSQAD FTVLQELPED
1001: VKADLFNVLP LHRPIDPTCR TSNVTENKSL KNGGTDDPKN PVICVLPGSS QKWAEQLRVS SSLLLNAIAE QHANSISSQP LSSILEHVAS LLPLCPTPGS
1101: EEWSDTLSRL SVLLTEYIHL KVDSDIEELY KCFLLLKRFS SASELFLELH NSILPLLQDS ITQHYGGTLR L
0001: MKRSLGSNSS NNSGSGSNKK SKKNNNPSNQ KTLGAAWGAA SSRSSFRSSP FSDFGSYMEV KNRKLQNQFE TEASAASRGV SGSEKLIFQG VSIFVDGFTI
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P
Arabidopsis Description
REV1DNA repair protein REV1 [Source:UniProtKB/Swiss-Prot;Acc:A3EWL3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.