Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G329300.8 | Wheat | nucleus | 11.23 | 8.06 |
| GSMUA_Achr1P18160_001 | Banana | nucleus | 7.56 | 7.26 |
| TraesCS4B01G080200.1 | Wheat | nucleus | 10.15 | 7.18 |
| PGSC0003DMT400066206 | Potato | cytosol, plastid | 5.62 | 6.99 |
| TraesCS7B01G335900.1 | Wheat | plastid | 12.31 | 4.87 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G319400.1 | EnsemblPlantsGene:TraesCS7B01G319400 | Gene3D:3.30.1490.100 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003684 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006281 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | InterPro:DNA_pol_Y-fam_lit_finger_sf | InterPro:IPR036775 | KEGG:00230+2.7.7.7 |
| KEGG:00240+2.7.7.7 | PANTHER:PTHR11076 | PANTHER:PTHR11076:SF12 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7B:+:569433781..569436524
Molecular Weight (calculated)
51545.4 Da
IEP (calculated)
6.860
GRAVY (calculated)
-0.286
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRSTTITGA TDNLLTLQRI ARHLFAALHV DVKEVRGVGL KMSKLEHADL VRGAPQGNML KSWLGSSSEK LKKQCSERTC FLKNSDDAGT SEVRNLGSSR
101: PLFTGVASHS SKVNLTGGRS TRVHAVELPP LSELDLEVLK NLPPEIISEM NDYKGELHGF QCMRSSDEGK ESNSKSRVLS AVNQNSVPVS NARLHQYGER
201: TDSMHLEKRN NIKGASDEEV QTAHASCSRA NELIDTESDT RLDFVPNSLS QADFTILQEL PEDVKADLFN VLPLHRSIDP TRHTSNVTEN KSLKNGGTDD
301: PKNPVICVLP GSSEKWAEQF RVSSSLLLKA IAEQHANSIS SQPLSSILEH AASLLLLCPP SGSEEWNDTL SRSVLLTVYI HLKVDSDIEE LYKCFLLLKR
401: FSSASELFLE WHNSILPLLQ VKFTCSMLSF CLWTRLLRFT SVFVMARLQV LCFITFGFHK HEE
101: PLFTGVASHS SKVNLTGGRS TRVHAVELPP LSELDLEVLK NLPPEIISEM NDYKGELHGF QCMRSSDEGK ESNSKSRVLS AVNQNSVPVS NARLHQYGER
201: TDSMHLEKRN NIKGASDEEV QTAHASCSRA NELIDTESDT RLDFVPNSLS QADFTILQEL PEDVKADLFN VLPLHRSIDP TRHTSNVTEN KSLKNGGTDD
301: PKNPVICVLP GSSEKWAEQF RVSSSLLLKA IAEQHANSIS SQPLSSILEH AASLLLLCPP SGSEEWNDTL SRSVLLTVYI HLKVDSDIEE LYKCFLLLKR
401: FSSASELFLE WHNSILPLLQ VKFTCSMLSF CLWTRLLRFT SVFVMARLQV LCFITFGFHK HEE
0001: MKRSLGSNSS NNSGSGSNKK SKKNNNPSNQ KTLGAAWGAA SSRSSFRSSP FSDFGSYMEV KNRKLQNQFE TEASAASRGV SGSEKLIFQG VSIFVDGFTI
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P
0101: PSHQELKGYM MKYGGRFENY FSRRSVTHII CSNLPDSKVK NLRTFSRGLP VVKPTWIVDS ISANRLLGWV PYQLDQLNDT QPKLSAFFAP RSHLTPQMAS
0201: PVTSFQPDTG YSEAEEGSSI RADDSEEARD HIDDEIDGVY IENTTPELTE QTGTGDLKSS EMNAEGLGNY DIEEKEVSSE LQSTTNLHST SDNKSVHANG
0301: KNGGKSIATA AGSSTRRHST LEDPNFVENY FKNSRLHFIG TWRNRYRKRF HGSSNGLKWA DSGQNTAEMA KKSTIIHIDL DCFFVSVVIK NRLELHDKPV
0401: AVCHSDNPKG TAEISSANYP ARAYGVKAGM FVRHAKDLCP QLVIVPYNFE AYEEVADQFY DILHRHCRKV QALSCDEAFL DVSDLSDVET EVLASTIRNE
0501: ILETTGCSAS AGIGGTMLMA RLATRVAKPA GQLYISAEKV EEFLDQLPVG TLPGVGSVLK EKLVKQNIQT CGQLRLISKD SLQKDFGVKT GEMLWSYSRG
0601: LDLRSVTAVQ ESKSIGAEVN WGVRFRDQQD VQHFLQCLCK EVSLRLQGCE MIGRTFTLKI KKRKKDAEEP TKYMGCGDCD NLSRSITVPA ATDDIEVLQR
0701: ISKKLFGSFC LDVKEVRGVG LQVSKLDSAD PSNKGSRTLK SWLSSAPAVV QIEQDDNVFA AKVRENSDCN RPVTGGVSRL RESNSEESSI QSGDTNSSLP
0801: PMCYLDMEVL ENLPPELLSE LDGTYGGKLF ELIEKKRGKR RINCNSPHVS LDGTAASIKE LKSLSVKIHG LSTSGEKEYK EPYVPHPSIA RTSNQHTIEM
0901: TDLLPSSLSQ VDVSVLQELP EELRADVLGA FPSHRRQQSS SDVPKETCKK QDEEPIDLKG TENEIGLSFS SLWFGNPPLW TEKFKVSGNC TMEKLSAIYF
1001: KVAQSRPMLS LVLQHAISEM SSFPDAASAS DLDKAIYDVC ELLKQYINLK VGGDIEEIYL CFRLLKRLAA RSQLFLQVYE ILSPFIQASI SEHYGGSLSI
1101: P
Arabidopsis Description
REV1DNA repair protein REV1 [Source:UniProtKB/Swiss-Prot;Acc:A3EWL3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.