Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400017844 | Potato | nucleus | 91.34 | 92.73 |
| Solyc02g087960.2.1 | Tomato | nucleus | 51.94 | 59.59 |
| Solyc10g081490.1.1 | Tomato | nucleus | 40.3 | 50.0 |
| Solyc03g116100.2.1 | Tomato | nucleus | 48.66 | 48.95 |
| Solyc06g069850.2.1 | Tomato | nucleus | 50.15 | 44.56 |
| Solyc09g010840.1.1 | Tomato | nucleus | 19.7 | 18.33 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| UniProt:K4B766 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF902 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc02g067340.2 | EnsemblPlants:Solyc02g067340.2.1 | UniParc:UPI00027691CC |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:37540718..37543728
Molecular Weight (calculated)
37399.7 Da
IEP (calculated)
5.935
GRAVY (calculated)
-0.702
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRVPCCDKM GVKKGPWTPE EDIMLVSYVQ QHGPGNWRAL PTKTGLRRCS KSCRLRWTNY LRPGIKRGNF TDQEEKMIIQ LQALLGNKWA AIASYLPERT
101: DNDIKNYWNT HLKKKMKRLD QCHGSNDLFS LENGLTHLSS SNSSTSRGQW ERTLQADINM AKKALHNALS LENPTSSHNN NIKQENTQVS STSTIYASST
201: ENIARLLQGW IGSSTSSTNN SESSKTSSNN IATTDSSSCD GTPNAETKGG MGLMEAFESL FGLESFESSS SDELSQTTTP EAIKIEIKKE ENEHDVEVPL
301: SIILENWLLD ENTLNIQPKN DLTTLISFDE TPQLF
101: DNDIKNYWNT HLKKKMKRLD QCHGSNDLFS LENGLTHLSS SNSSTSRGQW ERTLQADINM AKKALHNALS LENPTSSHNN NIKQENTQVS STSTIYASST
201: ENIARLLQGW IGSSTSSTNN SESSKTSSNN IATTDSSSCD GTPNAETKGG MGLMEAFESL FGLESFESSS SDELSQTTTP EAIKIEIKKE ENEHDVEVPL
301: SIILENWLLD ENTLNIQPKN DLTTLISFDE TPQLF
001: MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTHTGLRRCS KSCRLRWTNY LRPGIKRGNF TEHEEKMILH LQALLGNRWA AIASYLPERT
101: DNDIKNYWNT HLKKKLKKMN DSCDSTINNG LDNKDFSISN KNTTSHQSSN SSKGQWERRL QTDINMAKQA LCDALSIDKP QNPTNFSIPD LGYGPSSSSS
201: STTTTTTTTR NTNPYPSGVY ASSAENIARL LQNFMKDTPK TSVPLPVAAT EMAITTAASS PSTTEGDGEG IDHSLFSFNS IDEAEEKPKL IDHDINGLIT
301: QGSLSLFEKW LFDEQSHDMI INNMSLEGQE VLF
101: DNDIKNYWNT HLKKKLKKMN DSCDSTINNG LDNKDFSISN KNTTSHQSSN SSKGQWERRL QTDINMAKQA LCDALSIDKP QNPTNFSIPD LGYGPSSSSS
201: STTTTTTTTR NTNPYPSGVY ASSAENIARL LQNFMKDTPK TSVPLPVAAT EMAITTAASS PSTTEGDGEG IDHSLFSFNS IDEAEEKPKL IDHDINGLIT
301: QGSLSLFEKW LFDEQSHDMI INNMSLEGQE VLF
Arabidopsis Description
MYB94Transcription factor MYB94 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN78]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.